Hi, I want to estimate Vst value across different population based on the copy number data. I have 5 populations and in each population, I …

Dear all, recently i performed de novo analysis of one genome. To check variations in transcriptome, we perform the assembly with and without replicates. Interestiny, …

How can we estimate total **percentage of alternative splicing** in a specie, for example when we day percentage of AS in Arabidopsis is around 61 …

I am trying to estimate coverage depth for my de novo transcriptome assembly. I used Illumina Hiseq 3000/4000 PE with a PF yield of 140 …

**Comparative Genomics** Berlin, 1-5 October 2018 ---------- General Topic: Comparative genomics with a focus on structural variation ---------- Instructors: Dr. Fritz J Sedlazeck (Lead Scientific …

Hi all, I did de novo transcriptome assembly using paired-end reads from Illumina Hiseq 2000 for a non-model organism. I mapped back reads to transcriptome …

Hello, I'm seeking methodology advice on a little project I'm working on. I've identified structural variations over an entire genome and found few spots especially …

Hello, Does HGAP is efficient for assembling Pacbio reads of an estimate genome size of 700 MB ? Where can I find benchmark test for …

<p>I've been given a set of three <strong>BAM</strong> (father, mother, child) and I expect the child to contains some <em>de-novo</em> heterozygous variations . <strong>samtools mpileup</strong> …

<p>Hello</p> <p>I'm not from a biology background and would appreciate a little help. How did the HapMap project work out its predictions for human variation …