how to find out protein changes from SNPs
I already got VCF files with annotated SNPs, but I also need to know whether protein structure changes or not. Any tools recommended?
• 376 views
•
link
written
by
shangzhenhua08 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Germline and somatic SNPs in same or different allele
written by Nacho del Valle •
-
Compare two VCF / BAM / FASTQ files for degree of relativity
written by Akos •
-
PRIDE (Proteome Identification database) non annotated proteins question
written by tiago.cabral422 •
-
Considering aneuploidy, ploidy, and CNV when performing ABHet filtering on VCF files
written by Jackson •
-
snps causing protein change
written by shangzhenhua08 •
-
Tools for predicting the protein altering effects of the variants from EXON-seq data
written by a.james
-
Tools to predict the structure change of one protein with one amino acid change
written by yehchan57 •
-
Swiss-Model vs. Modeller
written by ceno980 •
-
Annotation of XHMM VCF file (CNV analysis)
written by nkausthu •
-
Problem including additional annotations to vcf using snpEff
written by sumudu_rangika •
Hello shangzhenhua08!
Questions similar to yours can already be found at:
We have closed your question to allow us to keep similar content in the same thread.
If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.
Cheers!