snps causing protein change
I have one VCF file which contain SNPs calls with annotation. Currently, I am trying to figure out how to detect SNPs changing protein structure. Any tools are recommended? Thank you so much.
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shangzhenhua08 •
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Hello shangzhenhua08!
We believe that this post does not fit the main topic of this site.
this question has been asked many times. eg: Get Amino Acid Changes From Snp Calls search this site for VEP and/or SNPEFF
For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.
If you disagree please tell us why in a reply below, we'll be happy to talk about it.
Cheers!
if my previous answer was of help ( freebayes issue for BAM file ) , you should validate+close it : (green mark on the left of my answer)