Genome tracks, Genome viewer, Genome Track Data
Hi!
I am looking for best tool represent different format files into single genome track file. I am working on Arabidopsis and I want to show methylation and nucleosome data on superimposing on genome coordinates. I have files in BigWig, Bed and BAM format.
Any help is much appreciated.
Thank you!
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IGV. If you want a more elaborate answer please add details on how you plan to present these data.
Thank you! for your reply. I want to plot chromosome wise Differential methylation regions, Differential Nucleosome positions, and Splice Junctions all together against reference genome. I have all files in BED format.
Thank you! Best
GenomeView, which (in contrast to IGV) allows editing as well.
Thank you! for your reply. I want to plot chromosome wise Differential methylation regions, Differential Nucleosome positions, and Splice Junctions all together against reference genome. I have all files in BED format.
Thank you! Best