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bioyas
bioyas
Reputation:
20
Joined:
9.4 years ago
Last seen:
1.8 years ago
Location:
USA
Latest posts by user
1 vote
1 reply
1.1K views
How to use lme4() to perform differential expression on bulk RNA seq data with multiple random effects?
bulkrnaseq lme4
updated by ATpoint ATpoint • written by bioyas • bioyas
0 votes
1 reply
850 views
Downloading the raw microarray data from GEO
.gpr microarray .cel
updated by GenoMax GenoMax • written by bioyas • bioyas
0 votes
0 replies
0 views
Comment: Comment: Tutorial for analysing gpr files of microarray
written by bioyas • bioyas
0 votes
0 replies
1.1K views
Integration of scatac-seq data with another integrated scRNA and scATAC data set
signac integration scatac seurat scrna
written by bioyas • bioyas
0 votes
1 reply
1.2K views
separate read1 and read2 from merged fastq file and align against reference genome
fastq alignment regex headers
updated by seidel seidel • written by bioyas • bioyas
0 votes
0 replies
0 views
Comment: Comment: different pileups between sorted.bam file and bigwig file
written by bioyas • bioyas
0 votes
1 reply
0 views
Comment: Comment: Loading possorted_genome_bam.bam generated by 10X cellranger count command into
written by bioyas • bioyas
0 votes
2 replies
1.2K views
different pileups between sorted.bam file and bigwig file
bigwig deeptools igv
updated by Ram Ram • written by bioyas • bioyas
0 votes
1 reply
0 views
Comment: Comment: Loading possorted_genome_bam.bam generated by 10X cellranger count command into
written by bioyas • bioyas
0 votes
5 replies
3.8K views
Loading possorted_genome_bam.bam generated by 10X cellranger count command into IGV.
cellranger deeptools bigwig igv single-cell
updated by Ram Ram • written by bioyas • bioyas
0 votes
2 replies
4.9K views
quantify counts from sorted bam files using a bed file containing regions of interest
counts featurecount bam bed
updated by Malcolm.Cook Malcolm.Cook • written by bioyas • bioyas
0 votes
1 reply
0 views
Comment: Comment: filter out fasta File by pattern
written by bioyas • bioyas
0 votes
4 replies
2.2K views
Convert per base bedgraph to Bed format
bedgraph perbase bed bedtools
updated by Alex Reynolds Alex Reynolds • written by bioyas • bioyas
0 votes
0 replies
0 views
Comment: C: How to Identify Housekeeping genes from gene expression matrix and normalize the
written by bioyas • bioyas
0 votes
1 reply
0 views
Comment: C: How to Identify Housekeeping genes from gene expression matrix and normalize the
written by bioyas • bioyas
0 votes
1 reply
0 views
Comment: C: How to Identify Housekeeping genes from gene expression matrix and normalize the
written by bioyas • bioyas
1 vote
6 replies
2.8K views
How to Identify Housekeeping genes from gene expression matrix and normalize the data
housekeeping genes normalization r edger limma
written by bioyas • bioyas
0 votes
0 replies
0 views
Comment: C: Differential Expression analysis between single cell RNa seq & bulk RNa seq data
written by bioyas • bioyas
0 votes
3 replies
2.2K views
Differential Expression analysis between single cell RNa seq & bulk RNa seq data
rna-seq bulk rna seq de analysis sc-rna-sq
updated by swbarnes2 swbarnes2 • written by bioyas • bioyas
0 votes
1 reply
0 views
Comment: C: Can the code of a R package be changed? How?
written by bioyas • bioyas
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