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Where can I find a tutorial of WGCNA from proteomic data?

I am working label-free proteomic and I've got protein identification from Maxquant output. I would like to do the WGCNA but I only found the tutorial of WGCNA in gene expression. Therefore, I would like to know where can I find a tutorial of WGCNA from proteomic data (Maxquant output) or Can I use the same R script and function regarding this link https://horvath.genetics.ucla.edu/html/CoexpressionNetwork/Rpackages/WGCNA/Tutorials/

r proteomics label-free wgcna
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updated by ATpoint ATpoint • written by hothotbemizz • hothotbemizz

1 answer

Yes, you can use the same functions. Just ensure that you use the normalised data, and, preferably, ensure that it is additionally transformed and follows a normal distribution, although this final point is not key.

Kevin

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written by Kevin Blighe Kevin Blighe

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