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shivangi.agarwal800
shivangi.agarwal800
Reputation:
120
Joined:
8.6 years ago
Last seen:
2.8 years ago
Location:
India
Latest posts by user
0 votes
1 reply
895 views
How to trim bases with bbduk.sh
bbmap fastq
updated by Ram Ram • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
2 replies
1.2K views
Denovo variants
denovo gvcf trio
updated by luffy • luffy • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
2 replies
1.5K views
Fastq deduplication levels
sequence levels deduplication
updated by GenoMax GenoMax • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
2 replies
2.9K views
TCGA RNA Quantification
rna-seq tcga
updated by jv jv • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
2 replies
2.0K views
Ubuntu upgrade error
21.04 offtopic
updated by Arup Ghosh Arup Ghosh • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
0 replies
672 views
Allele frequency
vaf
written by shivangi.agarwal800 shivangi.agarwal800
0 votes
1 reply
0 views
Comment: Comment: single cell
updated by GenoMax GenoMax • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
1 reply
0 views
Comment: Comment: single cell
written by shivangi.agarwal800 shivangi.agarwal800
0 votes
5 replies
3.8K views
single cell - generating cellranger counts from FASTQ files
10x cellranger
updated by seidel seidel • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
1 reply
0 views
Comment: Comment: SCRNA analysis
written by shivangi.agarwal800 shivangi.agarwal800
1 vote
4 replies
1.9K views
SCRNA analysis
single cell
updated by ATpoint ATpoint • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
2 replies
1.2K views
Clustering of samples based on gene expression
cluster
updated by Ram Ram • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
3 replies
1.5K views
Hierarchical clustering in r
cluster
updated by Mensur Dlakic Mensur Dlakic • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
0 replies
688 views
Print all Venn components using Python script
venn python
written by shivangi.agarwal800 shivangi.agarwal800
1 vote
0 replies
1.3K views
CNV calling using CN.MOPS
wes cnv cn.mops
written by shivangi.agarwal800 shivangi.agarwal800
0 votes
0 replies
0 views
Comment: Comment: Alignment report
written by shivangi.agarwal800 shivangi.agarwal800
0 votes
1 reply
0 views
Comment: Comment: Alignment report
updated by Istvan Albert Istvan Albert • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
0 replies
0 views
Comment: Comment: Alignment report
written by shivangi.agarwal800 shivangi.agarwal800
0 votes
1 reply
982 views
Variant calling for matched samples
vcf matched
updated by shiyang_bio • shiyang_bio • written by shivangi.agarwal800 shivangi.agarwal800
0 votes
0 replies
0 views
Comment: Comment: Bwa on multiple processor
written by shivangi.agarwal800 shivangi.agarwal800
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