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1000 Human Genomes Project Population Alignment Data

I found raw variant calls for individuals in high coverage data (30X) which I found right here:

ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/data_collections/1000G_2504_high_coverage/working/20190425_NYGC_GATK/raw_calls/

Where could I find either the BAM/CRAM files used or population VCFs?

Thank you.

alignment genome snp next-gen
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updated by finswimmer finswimmer • written by AXR • AXR

2 answers

Hello,

the corresponding alignment files are here:

fin swimmer

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written by finswimmer finswimmer

Here it is all the data (also including low coverage): http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/data_collections/1000_genomes_project/

You can make a script to download only high coverage ones.

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written by juanjo75es juanjo75es

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