jyoti.khadake, don't be surprised that the coordinates in this case are the same between both genome versions. This is probably because these variants are at the very edge of chromosome 1 where no coordinate changes might have happened. If you go further down the list, e.g. setting limit to 10000 and tail would give you
rs867243565 chr1 667509 667510 chr1 732129 732130
rs1000204238 chr1 667550 667551 chr1 732170 732171
rs372806026 chr1 667626 667627 chr1 732246 732247
rs377315554 chr1 667630 667631 chr1 732250 732251
rs1053994779 chr1 667637 667638 chr1 732257 732258
rs369862000 chr1 667655 667656 chr1 732275 732276
rs201764515 chr1 667665 667666 chr1 732285 732286
rs893969505 chr1 667702 667703 chr1 732322 732323
rs879921095 chr1 667781 667782 chr1 732401 732402
rs1012409450 chr1 667813 667814 chr1 732433 732434
so coordinates are starting to changing at some point.
Thanks that works. This is where I got the originals anyway. best, J
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PS. can I \T it so the output can be redirected?
just redirect the output like a standard cmd line, the formatting will be removed.