Suggestions for R/Bioconductor packages for GSE analysis
Hi everyone, which are the most used R / Bioconductor packages to perform a gene set enrichment analysis?
Thanks, Kieran
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Based on the 100 most downloaded Bioconductor pacakges:
The Broad also has their own R script/package I think: https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php/R-GSEA_Readme
Feel free to correct me if I missed some.
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Thanks a lot! Very helpful