This is a test version of Biostars. For the public version, visit https://www.biostars.org.
BPGA Functional Analysis not working

Hi, I have been using BPGA (Bacterial Pan Genome Analysis) to analyze a set of genomes in order to investigate both the pan-genome (core, accessory and unique genes) and the functional differences between the different strains.

However, when trying to call the functional analysis, I get a File Error (cog.udb and usearch.exe missing). Usearch, I am sure I have it in the folder. But I have no idea of what cog.udb is and where to find it.

Any idea? Or alternative software to perform the functional analysis?

next-gen genome software error

0 answers

No answers yet.

Log in to answer this question.