Question about Coverage and identity for a good prediction of Pan-proteome
Dear colleagues,
I want to predict the pan-proteome on 25 strains of the same species (each strain contains more than 9000 proteins). I want to know what are the values (%) of coverage and identity to use for a good prediction of Pan (Core and accessory) ??
For information I used proteinortho.
Looking forward to your answers
Best regards
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