How to translate mutations in genome/exome to string of amino acid, with amino acid resulting from the mutation centrally situated.
You are looking for six frame translation and you can use translate function in R. Here you can find example.
I am going to guess that OP is looking for something more specific. Like Ve!P/snpEff but with more sequence padded to both sides of changed AA (which both will show).
The function can translate DNA to Protein sequence, but I am looking for a translation which will think about the location of DNA sequence.
Not exactly sure what you are saying here. Are you referring to frame of translation?
like this function, but I want to find hg38 other than ensembl version annotation.
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