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Translate nucleotide to amino acid (not including intron)

Hello,

If I want to translate nucleotide to amino acid but this amino acid have not intron included. I would like to translate because I would like to use this translated amino acid to blastp for identify function in my interested organism. If anyone know any tool or another ways that can do like above, please let me know.

Thank you advance,

PS. In fundamental knowledge, I would like to annoy who one can translate this nucleotide sequence to amino acid sequence. For example for me. Because I do not sure, I understand right, or not?

ATGTCAGAATCTTCAAACGCATCGCCTAATGCCAGCCCCTCTGTATCGGCCACTCGCGGAACTAGTCACAACACCCAGGCTATAACGAGCGTGCCAGGCCGCTACATTCATCCATACAAGCTAAAGAACATGCTTCAGGCTCGGTTTGGCGACAATTACTCGGTTGAGATACGCGCCGATAATTACACAATCTCGGCTGGGCATAAGATTCCATACACCGATATAAAGAGGTGCTATTGA

Could everyone translate above nucleotide sequence to amino acid sequence for me, please? For example that How can I know which tool can translate with not include INTRON for me?

amino-acid translate nucleotide
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updated by Ram Ram • written by nut_B • nut_B

1 answer

It's better to use blastx if you have unspliced DNA. You'll find the regions matching the target protein.

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written by Asaf Asaf

Hello Asaf,

I would like to translate it because I have to blastp with another result from another ORFs prediction tool. Result from other ORFs prediction tool was amino acid sequence. But this answer is better way for me. Thank you very much.

Thank you very much.

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written by nut_B • nut_B

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