Biostar Beta. Not for public use.
What tools can be used for analysis of structural variants in targeted sequencing data?
0
Entering edit mode
2.2 years ago
mittu1602 • 150
India

What are possible tools that can be used for analysis of structural variants and easy to interpret in targeted sequencing data approach without providing control samples (Human samples) ?

Thank you.

ADD COMMENTlink
0
Entering edit mode

pindel might be worth a look, though I don't know how well it works for targeted sequencing data. Think it's meant more for whole genome analysis.

ADD REPLYlink
0
Entering edit mode
18 months ago
Sparrow_kop • 200
China

Hi, I recently also conduct the SV analysis of target sequencing. From my own experience, I think you can try manta, a very sensitive and high performance tool which also under active maintain. Also It can analysis single sample without control sample, you can refer the manual.

ADD COMMENTlink

Login before adding your answer.

Similar Posts
Loading Similar Posts
Powered by the version 2.1