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whb
whb
Reputation:
60
Joined:
7.0 years ago
Last seen:
2.8 years ago
Location:
Australia
Latest posts by user
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Comment: Comment: liftover bed not matching panel gene names
written by whb • whb
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1 reply
1.0K views
liftover bed not matching panel gene names
liftover vcf bed bedtools
written by whb • whb
0 votes
0 replies
1.2K views
Using snpsift to annotate vcf with dbsnp and Clinvar
snpsift
written by whb • whb
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0 replies
794 views
Real variant - Minimum allele frequency and alt count?
alt somatic af vcf
written by whb • whb
0 votes
0 replies
0 views
Comment: Comment: Mutations in contiguous sites within a sample
written by whb • whb
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2 replies
1.3K views
Mutations in contiguous sites within a sample
snp vcf
written by whb • whb
0 votes
0 replies
0 views
Comment: Comment: Determine strand info of somatic mutations
written by whb • whb
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1 reply
0 views
Comment: Comment: Determine strand info of somatic mutations
written by whb • whb
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5 replies
2.1K views
Determine strand info of somatic mutations
strand dna
updated by cpad0112 cpad0112 • written by whb • whb
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0 replies
0 views
Comment: Comment: lofreq empty output?
written by whb • whb
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0 replies
758 views
dbSNP specific to C57BL6J
c57bl6j dbsnp
updated by ATpoint ATpoint • written by whb • whb
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0 replies
784 views
detect and combine indels into one line like Mutect2 format
indels snvs vcf
written by whb • whb
0 votes
1 reply
1.6K views
SnpSift to annotate vcf with multiple databases
annotate vcf snpsift
updated by Zeng Jingyu • Zeng Jingyu • written by whb • whb
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0 replies
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Comment: Comment: bed intersect to get gene names from bed
written by whb • whb
0 votes
1 reply
0 views
Comment: Comment: bed intersect to get gene names from bed
written by whb • whb
1 vote
5 replies
2.8K views
bed intersect to get gene names from bed
bedtools intersect
updated by Alex Reynolds Alex Reynolds • written by whb • whb
0 votes
0 replies
742 views
filter Refseq file with bed? to produce coverage per gene
coverage bed refseq
written by whb • whb
0 votes
1 reply
0 views
Comment: Comment: DepthOfCoverage Error: no suitable codec found
written by whb • whb
0 votes
3 replies
2.4K views
DepthOfCoverage Error: no suitable codec found
coverage depthofcoverage depth
updated by Pierre Lindenbaum Pierre Lindenbaum • written by whb • whb
0 votes
6 replies
2.5K views
A bash question
bash
updated by GenoMax GenoMax • written by whb • whb
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