rMATS calculate intron retention
hello, I'm a fresh man in bioinformatics. I use rMATS to get the intron retention events, But I don't know what's the detail pepline rMATS done it. In the paper, it only talk the exon inclusion and exon skiping. Another question, I find IRcall seems can help me get IR events, but I can't find it in original site. anyone can help me ? thanks!
• 2,438 views
•
link
written
by
yuxinghai •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
What is the best approach/workflow to map rMATS alternative splicing events to full-length isoforms?
written by mahsa80.mm •
-
Producing sequence for splicing isoforms
written by tomas4482 •
-
How the "IJC" is calculated in rMATS tool?
written by Apex92 •
-
Alternative splicing events
written by Ezhil La •
-
Get upstream and downstream exon's starting site and ending site of an retained introns
written by Kai_Qi
-
Event-based software for alternative splicing with three conditions?
written by htyu1lmzta •
-
Identify reads that span intron-exon junctions in RNA-Seq
written by oriolebaltimore
-
Alternative splicing using rMATS
written by Bionic •
-
Extraction of splicing events and their quantification
written by Anil Kesarwani
-
Intron Retention And Alternative 5'3' Splice Site Identification
written by Arun
