This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Anil Kesarwani
Anil Kesarwani
Reputation:
90
Joined:
12.1 years ago
Last seen:
9.1 years ago
Location:
United States
Latest posts by user
1 vote
3 replies
4.3K views
MISO: Extraction of splicing events from user specified gene annotation (gtf or gff)
rna-seq miso
updated by deshpandenandan1975 • deshpandenandan1975 • written by Anil Kesarwani Anil Kesarwani
0 votes
0 replies
0 views
Comment: C: CLIP-Seq read density
written by Anil Kesarwani Anil Kesarwani
0 votes
2 replies
2.8K views
CLIP-Seq read density
rna-seq
updated by GenoMax GenoMax • written by Anil Kesarwani Anil Kesarwani
0 votes
0 replies
2.3K views
Normalization of CLIP peak by transcript level
rna-seq
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
1 vote
1 reply
3.2K views
How to calculate differential usage of splice junction
rna-seq
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
0 votes
0 replies
0 views
Comment: C: DEXSeq missing mate encountered
written by Anil Kesarwani Anil Kesarwani
0 votes
1 reply
0 views
Comment: C: DEXSeq missing mate encountered
written by Anil Kesarwani Anil Kesarwani
0 votes
5 replies
3.8K views
DEXSeq missing mate encountered
rna-seq
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
0 votes
0 replies
2.5K views
DEXSeq memory issue
rna-seq dexseq
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
0 votes
0 replies
0 views
Comment: Comment: Differential quantification of splice junction
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
0 votes
2 replies
3.0K views
Differential quantification of splice junction
dexseq rna-seq
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
0 votes
1 reply
3.4K views
How to count novel and known splice junction reads from BAM
rna-seq
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
1 vote
0 replies
5.2K views
Tool: rMATS: quantification of differential splicing
rna-seq
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
0 votes
1 reply
0 views
Answer: A: Can I Pre-Build The Shared Transcriptome Index For A Series Of Tophat Runs?
written by Anil Kesarwani Anil Kesarwani
1 vote
0 replies
3.2K views
How does MISO quantify genes with single isoform
rna-seq
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
1 vote
2 replies
2.7K views
Quantitative anlysis of alternative splicing events
rna-seq
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
0 votes
0 replies
0 views
Comment: Comment: How to run MISO with ENSEMBL GTF if reads were aligned against UCSC genome
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
0 votes
0 replies
0 views
Comment: Comment: How to run MISO with ENSEMBL GTF if reads were aligned against UCSC genome
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
2 votes
5 replies
4.9K views
How to run MISO with ENSEMBL GTF if reads were aligned against UCSC genome
rna-seq
updated by lavanya.kannan • lavanya.kannan • written by Anil Kesarwani Anil Kesarwani
0 votes
0 replies
0 views
Comment: Comment: How does the insert size parameter change after trimming (MATS tool)
updated by Ram Ram • written by Anil Kesarwani Anil Kesarwani
Latest awards to user
TODO: Awards