This is a test version of Biostars. For the public version, visit https://www.biostars.org.
What is the best approach/workflow to map rMATS alternative splicing events to full-length isoforms?

Hi everyone,I am analyzing RNA-Seq data using rMATS and have identified several statistically significant alternative splicing events (SE, MXE, RI, etc.) with FDR < 0.05 and high inclusion level differences.As rMATS focuses strictly on local splicing events rather than full-length transcripts, I need to find the actual isoform variants affected by these events. I am looking for the most reliable and standard workflow to achieve this.Thank you in advance for your time and help!

rmats alternative splicing isoform rna-seq

0 answers

No answers yet.

Log in to answer this question.