Reference assisted genome assembly - TOOLS
Hello all. I have the genome sequence of 3 non-conventional yeasts. There are several closed and draft genomes available which i want to use for -> Reference assisted genome assembly!
Can you recommend tools for Reference assisted genome assembly?
Preferable: multiple references can be used draft and closed genomes can be used as references phylogeny information not necessary
Thanks
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can you give more details about library, coverage etc..?
A general answer to your question would be here
Reference Assembly - Mapping Reads To A Reference Genome
and info about tools could be found here
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3121819/
You're more likely to get a useful answer if you ask a good question: see this post for guidance.