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Tariq Daouda
Tariq Daouda
Reputation:
220
Joined:
11.7 years ago
Last seen:
9.0 years ago
Location:
IRIC | Institute for Research in Immunology and Cancer
Twitter:
tariqdaouda
Latest posts by user
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Comment: Comment: pyGeno 1.2: Python package for Personalized Genomics and Proteomics
written by Tariq Daouda Tariq Daouda
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Answer: Answer: querying 5'UTR, first exon, and flanking sequences
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
2 votes
0 replies
1 view
Answer: Answer: FASTA and FASTQ tools
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
1 vote
1 reply
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Answer: Answer: Ensembl & biomaRt: extracting in-frame codons near specified position
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
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Answer: A: Ensembl REST requests for CDS sequences returning AA sequences
written by Tariq Daouda Tariq Daouda
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Answer: Answer: Ensembl REST: How to retrieve CDS from a protein id?
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
2 votes
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Answer: Answer: extract only geneID and gene symbol from GTF file
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
1 vote
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Answer: Answer: From Ensembl protein ID to sequence
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
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Comment: C: pyGeno 1.2: Python package for Personalized Genomics and Proteomics
written by Tariq Daouda Tariq Daouda
0 votes
1 reply
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Comment: Comment: pyGeno 1.2: Python package for Personalized Genomics and Proteomics
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
8 votes
8 replies
4.6K views
Tool: pyGeno 1.2: Python package for Personalized Genomics and Proteomics
python snp rna-seq dbsnp ensembl
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
4 votes
2 replies
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Answer: Answer: How to get gene name from coordinates using python.
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
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Answer: Answer: Parse VCF file
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
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Answer: Answer: downloading a Mus musculus genes dataset from ensembl biomart
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
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Answer: Answer: Need code to filter VCF files based on rsid using Pysam
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
0 votes
1 reply
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Comment: Comment: Need code to filter VCF files based on rsid using Pysam
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
0 votes
1 reply
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Comment: Comment: Need code to filter VCF files based on rsid using Pysam
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
0 votes
1 reply
1 view
Answer: Answer: Need code to filter VCF files based on rsid using Pysam
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
1 vote
1 reply
0 views
Comment: Comment: Storing genomes locally
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
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Comment: Comment: Storing genomes locally
updated by Ram Ram • written by Tariq Daouda Tariq Daouda
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