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Pipeline for RNA-seq analysis

Dear all,

Happy New Year!

I am going to analyze RNA-Seq data. Does anyone would like to share the pipeline for RNA-Seq analysis? I will appreciate it very much. Thank you!

rna-seq
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updated by Ram Ram • written by Chenglin Chenglin

Thank you very much! I'll take a look.

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written by Chenglin Chenglin

3 answers

May be you should also look at Informatics of RNA-Seq.

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updated by Ram Ram • written by GouthamAtla GouthamAtla

Thank you very much!

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updated by Ram Ram • written by Chenglin Chenglin

Check "The simple fool's guide to population genomics via RNA-Seq", available here.

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written by h.mon h.mon

Thank you very much!

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written by Chenglin Chenglin

Here's a very detailed pipeline

https://benchtobioinformatics.wordpress.com/2014/11/10/rnaseq-pipeline-alignment-to-de-analysis-gsea/

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written by Constantine Constantine

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