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find the gene islands

I have two genomes - one is in healthy condition and other one is in diseased state. I want to find the gene islands in health condition. How to find this?

gene genome

You don't give enough information: What's a 'genome' : a fasta sequence? Is it annotated? Why do you expect the there will be a specific "island" of genes?

No that genome contains fasta sequence only. I want to know about the pathogenic islands

1 answer

GIPSy: genomic island prediction software

Check this paper out in http://www.ncbi.nlm.nih.gov/pubmed/26376473

Manual

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