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Looking review paper about; From mapping NGS reads to quantification of gene expression

Hi all,

I'm looking for a good review paper, which discuss different tools and software from mapping NGS reads to quantifying gene expression levels.

Would someone give some suggestions?

next-gen sequence alignment rna-seq

1 answer

Systematic evaluation of spliced alignment programs for RNA-seq data

http://www.nature.com/nmeth/journal/v10/n12/full/nmeth.2722.html

Assessment of transcript reconstruction methods for RNA-seq

http://www.nature.com/nmeth/journal/v10/n12/full/nmeth.2714.html

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