Program For Retreiving Refseq Sequence
Hi,
Thanks in advance.I have to download the entire refseq files from NCBI.Is there any way to write a program for downloading these files ?
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link
updated
by
Giovanni M Dall'Olio
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written
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Divya •
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written
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Divya •
2 answers
If you're familiar with unix, have a look at those FTP/HTTP clients
- curl : http://curl.haxx.se/
- wget http://www.gnu.org/software/wget
- ....
as your question is not strictly related to bioinformatics (it could be any kind of file), you can also submit your problem at http://superuser.com/
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Pierre Lindenbaum
wget -r ftp://ftp.ncbi.nih.gov/refseq/release -w 1
this will download the whole latest refseq release on the current directory, recursively. The -w option is recommended because it will lightens the load on ncbi's server.
• 0 views
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updated
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Ram
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written
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Giovanni M Dall'Olio
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written
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Giovanni M Dall'Olio
wget and curl are very good options. If you want something more user-friendly, DownloadThemAll is a nice Firefox extension.
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Giovanni M Dall'Olio
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