This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Extract stderr from mapped BAM files of bowtie2

Hi, I didn't include --met-file or --met-stderr in my code while mapping reads with bowtie2. Is there any way I can extract these info from my BAM files? (I mapped the reads directly to BAM files). Can you please write the extraction code for me if there is any?

Thanks.

bowtie2 mapping chipseq

0 answers

No answers yet.

Log in to answer this question.