This is a test version of Biostars. For the public version, visit https://www.biostars.org.
gspirito
gspirito
Reputation:
10
Joined:
6.9 years ago
Last seen:
3.1 years ago
Location:
Italy
Latest posts by user
0 votes
3 replies
2.0K views
Obtain genomic coordinates of all occurrences of a small sequence (i.e: TCTTCTC) in a reference genome
biopython binding-site genomics
updated by LauferVA LauferVA • written by gspirito • gspirito
0 votes
0 replies
804 views
Check most expressed isoform of mouse gene in specific tissue
fantom gene-expression mgi mouse
updated by Ram Ram • written by gspirito • gspirito
0 votes
1 reply
2.0K views
ChIP-seq Peak calling from BED or WIG file
encode chip-seq
updated by ATpoint ATpoint • written by gspirito • gspirito
0 votes
1 reply
903 views
Histone marks enrichment analysis
rna-seq
updated by Ankit Ankit • written by gspirito • gspirito
0 votes
1 reply
900 views
Handling RNA-seq samples from the same individual in DEseq2 analysis
deseq2 rna-seq
updated by jared.andrews07 jared.andrews07 • written by gspirito • gspirito
0 votes
1 reply
1.7K views
Extract reads mapped within chosen intronic region from BAM file (no junctions)
bedtools rna-seq samtools
updated by Pierre Lindenbaum Pierre Lindenbaum • written by gspirito • gspirito
1 vote
1 reply
1.3K views
About gene expression data in FPKM stored in public databases
rna-seq
updated by Istvan Albert Istvan Albert • written by gspirito • gspirito
0 votes
0 replies
691 views
Histone modifications enrichment from genomic coordinates
sequence
written by gspirito • gspirito
0 votes
1 reply
0 views
Comment: C: RNA-seq based gene signature analysis
written by gspirito • gspirito
0 votes
3 replies
2.1K views
RNA-seq based gene signature analysis
rna-seq
updated by Kevin Blighe Kevin Blighe • written by gspirito • gspirito
0 votes
3 replies
2.3K views
Unbiased clustering from bulk tissue RNA-seq?
rna-seq clustering
updated by ATpoint ATpoint • written by gspirito • gspirito
0 votes
1 reply
1.3K views
Chromatin states in human neurons?
chip-seq chromatin states neuron
updated by German.M.Demidov German.M.Demidov • written by gspirito • gspirito
0 votes
2 replies
1.2K views
How can I assess the probability of a gene being disease-related?
gene networks gene gene interactions
updated by WouterDeCoster WouterDeCoster • written by gspirito • gspirito
0 votes
1 reply
1.4K views
Problem with Cytoskape/DyNets
dynets cytoscape gene network
written by gspirito • gspirito
Latest awards to user
TODO: Awards