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questions
1
vote
2
replies
320
views
TCGA metadata intersection
R
TCGA
GenomicDataCommons
TCGAbiolinks
10 weeks ago by
Darked89
4.6k
4
votes
5
replies
702
views
BD Rhapsody single cell RNA: usable sequence
single-cell
6 months ago by
Darked89
4.6k
3
votes
9
replies
1.6k
views
fastp dedup: identical reads only?
fastq
chip-seq
updated 12 months ago by
Istvan Albert
100k • written 12 months ago by
Darked89
4.6k
5
votes
4
replies
3.0k
views
Distance Tree For Gerp
conservation
phylogeny
updated 7 months ago by
Diana
• 0 • written 12.3 years ago by
Darked89
4.6k
2
votes
3
replies
1.0k
views
Q:Data files naming schemes
sequencing
updated 4.6 years ago by
Pierre Lindenbaum
161k • written 4.6 years ago by
Darked89
4.6k
13
votes
4
replies
4.6k
views
Gene Set(S) For Gene Predictor Training
gene
next-gen
sequencing
updated 5.7 years ago by
Ram
43k • written 13.9 years ago by
Darked89
4.6k
5
votes
6
replies
3.9k
views
Installing Ensembl Locally
genome
database
updated 5.7 years ago by
Ram
43k • written 14.0 years ago by
Darked89
4.6k
6
votes
3
replies
3.9k
views
How To Visualize Spliced Alignments Of Next Gen Sequencing Data?
splicing
next-gen-sequencing
visualization
updated 5 months ago by
Ram
43k • written 14.0 years ago by
Darked89
4.6k
8
votes
9
replies
4.9k
views
Instaling Reas Repeat Finding
repeats
next-gen-sequencing
updated 5 months ago by
Ram
43k • written 14.1 years ago by
Darked89
4.6k
28
votes
27
replies
15k
views
9 follow
Extracting A Subset Of Sequences From A Fastq File (Biopython Speed)
biopython
python
fastq
next-gen-sequencing
updated 5 months ago by
Ram
43k • written 14.1 years ago by
Darked89
4.6k
5
votes
2
replies
4.0k
views
Merging Blastx Hits From Overlapping Bacterial Genome Segments
blast
gff
annotation
genome
bacteria
updated 5.7 years ago by
Ram
43k • written 14.2 years ago by
Darked89
4.6k
28
votes
13
replies
14k
views
Taxonomy Of Blast Hits
blast
taxonomy
updated 6 months ago by
Ram
43k • written 14.2 years ago by
Darked89
4.6k
4
votes
5
replies
14k
views
Exonerate Protein2Genome Options And Output
genome
exonerate
updated 7.5 years ago by
Michael
54k • written 13.6 years ago by
Darked89
4.6k
7
votes
14
replies
5.0k
views
parsing BAM index (quick&dirty samtools view X.bam region)
jython
BAM
picard
htsjdk
samtools
updated 19 months ago by
Ram
43k • written 8.7 years ago by
Darked89
4.6k
0
votes
2
replies
1.9k
views
Paired Rnaseq Reads With Mates In Two Genes
rnaseq
updated 10.2 years ago by
Nicolas Rosewick
11k • written 10.2 years ago by
Darked89
4.6k
30
votes
6
replies
9.3k
views
K-Mer Based Sequencing Contamination Detection
sequencing
updated 6 months ago by
Ram
43k • written 14.2 years ago by
Darked89
4.6k
3
votes
3
replies
3.5k
views
Snps From Genome-2-Genome Alignment
snp
maf
vcf
updated 11.1 years ago by
matted
7.8k • written 11.1 years ago by
Darked89
4.6k
2
votes
1
reply
2.8k
views
Mapping 454 Rnaseq To A Genome
aligner
rna-seq
updated 11.2 years ago by
Rohit
★ 1.5k • written 11.3 years ago by
Darked89
4.6k
7
votes
3
replies
2.9k
views
Splitting Abacas Single Fasta Output
fasta
split
updated 11.9 years ago by
Lee Katz
★ 3.1k • written 12.1 years ago by
Darked89
4.6k
6
votes
3
replies
3.8k
views
Abyss Speed-Up Tricks
genome
assembly
updated 12.1 years ago by
Lars Juhl Jensen
11k • written 12.2 years ago by
Darked89
4.6k
4
votes
2
replies
3.0k
views
Cufflinks For Rare Transcript Detection
cufflinks
transcriptome
genome
tophat
updated 12.2 years ago by
Malachi Griffith
19k • written 12.2 years ago by
Darked89
4.6k
3
votes
4
replies
4.4k
views
Hard Masked + Raw Fasta To Soft Masked Fasta
python
code
updated 12.2 years ago by
Gustavo
▴ 530 • written 12.2 years ago by
Darked89
4.6k
7
votes
5
replies
5.9k
views
Standard Genome Plus Vcf To Variant Genome
genome
vcf
updated 12.3 years ago by
Swbarnes2
★ 1.6k • written 12.7 years ago by
Darked89
4.6k
2
votes
2
replies
5.4k
views
Ncbi Xml To Gff/Gtf
xml
gff
updated 12.7 years ago by
Daniel Standage
4.1k • written 12.7 years ago by
Darked89
4.6k
1
vote
2
replies
3.0k
views
Solid Split Rna-Seq Mapping
solid
rna
12.7 years ago by
Darked89
4.6k
17
votes
14
replies
8.7k
views
10 follow
Fast Qseq To Fastq Converter
fastq
next-gen
sequencing
updated 13.1 years ago by
crypticfortune
▴ 30 • written 13.1 years ago by
Darked89
4.6k
4
votes
3
replies
3.1k
views
Sra Data: Getting Rna-Seq /Ncrna Experiments Ids For A Taxon
sra
rna
small
updated 13.2 years ago by
Hamish
★ 3.2k • written 13.2 years ago by
Darked89
4.6k
8
votes
4
replies
3.6k
views
Gene Annotation Transfer: Ensembl To A Novel Assembly
genome
ensembl
updated 13.2 years ago by
Scott Cain
▴ 770 • written 13.2 years ago by
Darked89
4.6k
9
votes
6
replies
4.5k
views
6 follow
Ests Cleanup: Seqclean Alternatives?
sequence
est
updated 13.3 years ago by
Stephanie
• 0 • written 13.4 years ago by
Darked89
4.6k
10
votes
3
replies
6.3k
views
Gff Convertion To Wig/Bigwig
gff
wiggle
updated 13.3 years ago by
Brad Chapman
9.7k • written 13.4 years ago by
Darked89
4.6k
19
votes
7
replies
6.2k
views
Genome Annotation Quality Measure
genome
gene
updated 13.5 years ago by
Daniel Standage
4.1k • written 13.5 years ago by
Darked89
4.6k
31
votes
13
replies
32k
views
6 follow
Gff3 + Fasta To Genbank (Augustus Training Set)
gff
genbank
conversion
updated 13.6 years ago by
Gvj
▴ 470 • written 13.6 years ago by
Darked89
4.6k
19
votes
14
replies
18k
views
Sam Format Parsing / Stats
next-gen
sequencing
rna
short
aligner
14.0 years ago by
Darked89
4.6k
17
votes
4
replies
6.1k
views
Artemis, Apollo Or Anything For Genome Annotation Editing With Next Gen Sequence Data
genome
next-gen-sequencing
annotation
updated 5 months ago by
Ram
43k • written 14.1 years ago by
Darked89
4.6k
11
votes
4
replies
4.4k
views
Genome Specific Database (Gbrowse / Ensembl Type)
genome-annotation-database
sequence
updated 6 months ago by
Ram
43k • written 14.2 years ago by
Darked89
4.6k
35 results • Page
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