This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Lee Katz
Lee Katz
Reputation:
3,160
Joined:
16.1 years ago
Last seen:
3.5 years ago
Location:
Atlanta, GA
Google Scholar:
7ye89WMAAAAJ
Twitter:
lskatz

I am a bioinformatics scientist at Centers for Disease Control and Prevention (CDC).  I am interested in evolution of bacterial pathogens including Vibrio and Listeria.  What I write here does not necessarily reflect the opinions or views of CDC.

Latest posts by user
8 votes
1 reply
1.4K views
Blog: Micro Binfie Podcast
microbial-bioinformatics binfie podcast
updated by Ram Ram • written by Lee Katz Lee Katz
0 votes
0 replies
0 views
Comment: C: Mashtree tool for rapid WGS dendrograms
written by Lee Katz Lee Katz
2 votes
2 replies
1.9K views
Tool: Mashtree tool for rapid WGS dendrograms
perl dendrogram
updated by Ram Ram • written by Lee Katz Lee Katz
0 votes
0 replies
0 views
Comment: C: Script To Calculate A Distance Matrix Based On Tree File
written by Lee Katz Lee Katz
2 votes
1 reply
1 view
Answer: A: Bioperl gff3 : How to print non gff3 feature as "###" using Bio::Tools::GFF
written by Lee Katz Lee Katz
0 votes
1 reply
1 view
Answer: A: Bioperl gff3 : How to print non gff3 feature as "###" using Bio::Tools::GFF
written by Lee Katz Lee Katz
0 votes
0 replies
1 view
Answer: A: Pfge Prediction Based On Wgs
written by Lee Katz Lee Katz
0 votes
1 reply
1 view
Comment: C: Portable genome browser
written by Lee Katz Lee Katz
0 votes
1 reply
1 view
Comment: C: Bioperl gff3 : How to print non gff3 feature as "###" using Bio::Tools::GFF
written by Lee Katz Lee Katz
0 votes
1 reply
1 view
Comment: C: Portable genome browser
written by Lee Katz Lee Katz
0 votes
1 reply
1 view
Comment: C: Portable genome browser
written by Lee Katz Lee Katz
0 votes
2 replies
1 view
Comment: C: Portable genome browser
written by Lee Katz Lee Katz
0 votes
1 reply
1 view
Comment: C: Portable genome browser
written by Lee Katz Lee Katz
0 votes
1 reply
1 view
Comment: C: Portable genome browser
written by Lee Katz Lee Katz
0 votes
0 replies
1 view
Comment: C: Portable genome browser
written by Lee Katz Lee Katz
0 votes
21 replies
5.2K views
Portable genome browser
genome-browser jbrowse gbrowse portable
updated by cmdcolin cmdcolin • written by Lee Katz Lee Katz
5 votes
2 replies
0 views
Answer: A: Multisample vcf to table
written by Lee Katz Lee Katz
1 vote
1 reply
2.8K views
Polytomies and tree comparison
phylogeny polytomy bioperl ape tree-comparison
updated by jhc jhc • written by Lee Katz Lee Katz
0 votes
0 replies
0 views
Comment: C: Pileup viewer for VCF v4.2
updated by Ram Ram • written by Lee Katz Lee Katz
0 votes
0 replies
0 views
Comment: C: Challenge: Convert GenBank to Fasta without bioperl, without emboss, or any othe
updated by Ram Ram • written by Lee Katz Lee Katz
Latest awards to user
TODO: Awards