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2
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1
reply
964
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Answer: Answer: possible reasons that very few significant DEGs from RNAseq
17 months ago by vj ▴ 520
4
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2
replies
4.0k
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Comment: C: Transcript vs. Gene TPM counts?
4.5 years ago by vj ▴ 520
1
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0
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1.2k
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Answer: A: Detect gene expression signatures in own dataset
4.8 years ago by vj ▴ 520
0
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0
replies
1.3k
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Comment: C: Correct approach to identify differential binding in samples (with no duplicates
5.0 years ago by vj ▴ 520
1
vote
1
reply
1.3k
views
Answer: A: Correct approach to identify differential binding in samples (with no duplicates
5.0 years ago by vj ▴ 520
15
votes
5
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20k
views
Normalized Bigwig Files
bigwig
updated 5.1 years ago by • 0 • written 11.1 years ago by ▴ 520
0
votes
0
replies
5.6k
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Comment: C: Manorm For Differential Histone Binding In Chip-Seq Samples
updated 5.2 years ago by 43k • written 10.6 years ago by ▴ 520
0
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1
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5.6k
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Answer: A: Manorm For Differential Histone Binding In Chip-Seq Samples
updated 5.2 years ago by 43k • written 10.6 years ago by ▴ 520
0
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1
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4.5k
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Comment: C: Which normalization method to use FPKM/TPM?
5.5 years ago by vj ▴ 520
0
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3
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4.5k
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Comment: C: Which normalization method to use FPKM/TPM?
5.5 years ago by vj ▴ 520
1
vote
1
reply
4.5k
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Answer: A: Which normalization method to use FPKM/TPM?
5.5 years ago by vj ▴ 520
3
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0
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11k
views
Answer: A: How to convert transcript level TPM to gene level TPM ?
5.7 years ago by vj ▴ 520
1
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0
replies
1.3k
views
Answer: A: GSEA - Calculate the probability of each gene being enriched?
5.8 years ago by vj ▴ 520
0
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0
replies
2.6k
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Answer: A: Transcript Specific Expression Data
10.2 years ago by vj ▴ 520
0
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0
replies
6.2k
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Comment: C: Large Variation In Rpkm Values Of Different Biological Replicates From Cufflinks
10.2 years ago by vj ▴ 520
3
votes
0
replies
9.4k
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Answer: A: How Do I Search A Genome For A Known Motif, And Get An Interval File Of All Inst
10.2 years ago by vj ▴ 520
3
votes
0
replies
4.3k
views
Answer: A: Peak Length For Chip-Seq Data?
10.3 years ago by vj ▴ 520
1
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0
replies
2.4k
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Comment: C: Tf Names In Motifdb
10.3 years ago by vj ▴ 520
0
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1
reply
2.4k
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Answer: A: Tf Names In Motifdb
10.3 years ago by vj ▴ 520
13
votes
2
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56k
views
Answer: A: How To Write Data In A Granges Object To A Bed File.
10.4 years ago by vj ▴ 520
0
votes
0
replies
3.5k
views
Answer: A: How Does Cufflinks Compute The Fpkm For Reads That Do Not Map In The Proper Pair
10.4 years ago by vj ▴ 520
0
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0
replies
3.1k
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Answer: A: Mapping Protein Ids
10.4 years ago by vj ▴ 520
0
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1
reply
39k
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Answer: A: Best Way To Normalize Rna-Seq Data For Expression Profiling
10.4 years ago by vj ▴ 520
1
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0
replies
4.2k
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Comment: C: Normalizing Bam Files
10.4 years ago by vj ▴ 520
1
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0
replies
3.5k
views
Answer: A: What Tool/Package Would You Recommend For Clustering Large Gene Expression Data?
10.4 years ago by vj ▴ 520
0
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0
replies
6.5k
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Comment: C: How Can I Create Similarity Matrix From Gene Expression And Rnaseq Data?
10.4 years ago by vj ▴ 520
0
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0
replies
3.4k
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Comment: C: Removing Duplicates Reads (>= 5)
10.4 years ago by vj ▴ 520
3
votes
3
replies
3.4k
views
Removing Duplicates Reads (>= 5)
duplicates picard samtools
updated 10.4 years ago by ▴ 500 • written 10.4 years ago by ▴ 520
0
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0
replies
3.1k
views
Comment: C: Tool For Binning Windowbed Output For K-Means Clustering
10.6 years ago by vj ▴ 520
0
votes
0
replies
2.9k
views
Answer: A: Gsea To Find Function Of Predefined Set Of Genes?
10.6 years ago by vj ▴ 520
3
votes
1
reply
3.1k
views
Answer: A: Tool For Binning Windowbed Output For K-Means Clustering
10.6 years ago by vj ▴ 520
0
votes
0
replies
2.5k
views
Answer: A: Genome-Wide Motif Genomic Regions For Tfs
10.7 years ago by vj ▴ 520
1
vote
0
replies
5.4k
views
Answer: A: A Script To Find Each Seq In A Multiple Fasta Files
10.7 years ago by vj ▴ 520
1
vote
0
replies
3.2k
views
Answer: A: Looking For Motif Finding Tools That Work On Broad Peaks
10.7 years ago by vj ▴ 520
1
vote
0
replies
2.8k
views
Answer: A: Computing Similarity Between Lists Of Enriched Terms
10.7 years ago by vj ▴ 520
2
votes
0
replies
6.5k
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Answer: A: R: Heatmap Of Rna-Seq Count Table With Functional Gene Clustering
10.7 years ago by vj ▴ 520
1
vote
0
replies
11k
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Answer: A: Co-Expression Networks Of Rna-Seq
10.7 years ago by vj ▴ 520
0
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1
reply
2.9k
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Comment: C: Shrimp Uniquely Aligned Reads
11.1 years ago by vj ▴ 520
1
vote
3
replies
2.9k
views
Shrimp Uniquely Aligned Reads
rna-seq aligner samtools
updated 11.1 years ago by 12k • written 11.1 years ago by ▴ 520
0
votes
1
reply
10k
views
Comment: C: Kegg Pathway Analysis
11.1 years ago by vj ▴ 520
0
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0
replies
10k
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Comment: C: Kegg Pathway Analysis
11.1 years ago by vj ▴ 520
2
votes
5
replies
10k
views
Kegg Pathway Analysis
kegg pathway
updated 11.1 years ago by ▴ 180 • written 11.1 years ago by ▴ 520
0
votes
0
replies
20k
views
Comment: C: Normalized Bigwig Files
11.1 years ago by vj ▴ 520
43 results • Page 1 of 1
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