Question

Peak Length For Chip-Seq Data?

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10.3 years ago

liu4gre ▴ 210

What does the peak length exactly mean of chip-seq analysis? Is it the read length?

chip-seq ngs peak-calling • 4.3k views

ADD COMMENT • link updated 10.3 years ago by vj ▴ 520 • written 10.3 years ago by liu4gre ▴ 210

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Without any context, as in this question, it means nothing.

ADD REPLY • link 10.3 years ago by Neilfws 49k

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Sorry, I missed something. It is chip-seq data.

ADD REPLY • link 10.3 years ago by liu4gre ▴ 210

score 3 · Answer 1 · 2014-01-23

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10.3 years ago

vj ▴ 520

I assume you mean a ChIP-Seq peak you obtained from a peak-calling software. Then a peak length would be the length of the region where the reads are significantly enriched as deemed by the peak-caller that you have used.

ADD COMMENT • link 10.3 years ago by vj ▴ 520