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0
votes
1
reply
1.3k
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Comment:
Comment: If RNA-seq includes miRNA genes then why are there miRNA specific pipelines?
20 months ago by
Kermit
▴ 90
0
votes
1
reply
1.1k
views
Comment:
Comment: Gene types to use for RNA counts case-control
20 months ago by
Kermit
▴ 90
0
votes
1
reply
1.1k
views
Comment:
Comment: Gene types to use for RNA counts case-control
20 months ago by
Kermit
▴ 90
2
votes
7
replies
1.1k
views
Gene types to use for RNA counts case-control
rna
rnaseq
tpm
updated 20 months ago by
i.sudbery
19k • written 20 months ago by
Kermit
▴ 90
0
votes
2
replies
2.4k
views
Comment:
Comment: Why isn't GWAS used in oncology?
20 months ago by
Kermit
▴ 90
0
votes
0
replies
2.4k
views
Comment:
Comment: Why isn't GWAS used in oncology?
20 months ago by
Kermit
▴ 90
7
votes
14
replies
2.4k
views
7 follow
Forum:
Why isn't GWAS used in oncology?
gwas
association
oncology
studies
somatic
cancer
updated 20 months ago by
LChart
3.9k • written 21 months ago by
Kermit
▴ 90
0
votes
0
replies
2.4k
views
Comment:
Comment: Why isn't GWAS used in oncology?
21 months ago by
Kermit
▴ 90
0
votes
1
reply
1.0k
views
Comment:
Comment: Reference counts for RNA-seq
21 months ago by
Kermit
▴ 90
4
votes
5
replies
1.0k
views
Reference counts for RNA-seq
expression
rna
rna-seq
tpm
transcripts
updated 21 months ago by
ATpoint
82k • written 21 months ago by
Kermit
▴ 90
0
votes
1
reply
823
views
Comment:
Comment: What are GL*.* values in chr column of rna seq counts?
21 months ago by
Kermit
▴ 90
3
votes
3
replies
823
views
What are GL*.* values in chr column of rna seq counts?
reference
sequencing
rna-seq
rna
updated 21 months ago by
GenoMax
142k • written 21 months ago by
Kermit
▴ 90
0
votes
0
replies
21k
views
Comment:
Comment: Differences between FPKM and FPKM-UQ files in gene expression analysis
21 months ago by
Kermit
▴ 90
0
votes
0
replies
479
views
Tool:
AIQC - open source framework making deep learning accessible for researchers.
statistics
machine
multi-omic
learning
ai
2.3 years ago by
Kermit
▴ 90
8
votes
4
replies
1.1k
views
Are small insertions always single-stranded?
indel
updated 3.5 years ago by
Biostar
20 • written 4.8 years ago by
Kermit
▴ 90
1
vote
0
replies
970
views
How do BOLT and SAIGE calculate LD?... with PLINK LD?
plink
bolt
saige
gwas
4.3 years ago by
Kermit
▴ 90
0
votes
0
replies
699
views
Comment:
C: Noncoding annotations for WGS?
4.4 years ago by
Kermit
▴ 90
0
votes
2
replies
699
views
Noncoding annotations for WGS?
noncoding
intron
annotation
4.4 years ago by
Kermit
▴ 90
6
votes
5
replies
1.8k
views
VCF - does mother or father come first in the comma separated ALT
vcf
gvcf
heterozygous
updated 4.5 years ago by
Biostar
20 • written 4.9 years ago by
Kermit
▴ 90
0
votes
2
replies
1.1k
views
How rare are somatic mutations?
tumor
mutect
varscan
somatic
SNP
4.6 years ago by
Kermit
▴ 90
0
votes
0
replies
1.2k
views
Comment:
C: Are SV tools as thorough in CNV detection as CNVkit?
4.7 years ago by
Kermit
▴ 90
0
votes
1
reply
1.2k
views
Are SV tools as thorough in CNV detection as CNVkit?
cnv
sv
cnvkit
manta
parliament
4.7 years ago by
Kermit
▴ 90
0
votes
0
replies
3.1k
views
Comment:
C: VCF - what are overlapping variants?
4.8 years ago by
Kermit
▴ 90
0
votes
1
reply
1.1k
views
Comment:
C: Are small insertions always single-stranded?
4.8 years ago by
Kermit
▴ 90
0
votes
1
reply
3.1k
views
Comment:
C: VCF - what are overlapping variants?
4.8 years ago by
Kermit
▴ 90
8
votes
4
replies
3.1k
views
VCF - what are overlapping variants?
vcf
updated 4.8 years ago by
Pierre Lindenbaum
161k • written 4.8 years ago by
Kermit
▴ 90
0
votes
1
reply
1.8k
views
Comment:
C: VCF - does mother or father come first in the comma separated ALT
4.9 years ago by
Kermit
▴ 90
0
votes
0
replies
1.8k
views
Comment:
A: VCF - does mother or father come first in the comma separated ALT
4.9 years ago by
Kermit
▴ 90
0
votes
0
replies
1.8k
views
Comment:
C: VCF - does mother or father come first in the comma separated ALT
4.9 years ago by
Kermit
▴ 90
0
votes
1
reply
973
views
Comment:
C: gVCF what is a "break-end replacement"
4.9 years ago by
Kermit
▴ 90
2
votes
3
replies
973
views
gVCF what is a "break-end replacement"
gvcf
4.9 years ago by
Kermit
▴ 90
0
votes
0
replies
1.2k
views
PubSub or workflows or both?
workflow
pubsub
events
python
5.4 years ago by
Kermit
▴ 90
0
votes
1
reply
26k
views
Comment:
A: Creating workflows with snakemake and conda
5.4 years ago by
Kermit
▴ 90
3
votes
1
reply
918
views
Does vcf spec indicate cnv duplication of snps?
vcf
cnv
snp
snv
ngs
5.8 years ago by
Kermit
▴ 90
17
votes
9
replies
2.8k
views
6 follow
Workflows! Where is the code?
cwl
wdl
workflows
updated 5.9 years ago by
Michael R. Crusoe
★ 1.9k • written 6.0 years ago by
Kermit
▴ 90
0
votes
1
reply
2.8k
views
Comment:
C: Workflows! Where is the code?
6.0 years ago by
Kermit
▴ 90
4
votes
2
replies
1.5k
views
Encrypting BAM files
gdpr
hipaa
encryption
updated 6.2 years ago by
Biostar
20 • written 6.3 years ago by
Kermit
▴ 90
0
votes
1
reply
2.8k
views
Blog:
Clarifying the concept of clinical annotation vs bioinformatic annotation
variant-annotation
reference-data
updated 15 months ago by
Ram
43k • written 6.5 years ago by
Kermit
▴ 90
88 results • Page
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