Question

Does vcf spec indicate cnv duplication of snps?

1

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5.8 years ago

Kermit ▴ 90

Does the VCF spec have any way of indicating if a particular SNP is being duplicated due to CNV?

Perhaps in the pipe delimited columns?

vcf cnv snp snv ngs • 915 views

ADD COMMENT • link 5.8 years ago by Kermit ▴ 90

score 2 · Answer 1 · 2018-07-16

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5.8 years ago

Ram 43k

No, it does not - not unless an annotation tool adds that information in there.

ADD COMMENT • link 5.8 years ago by Ram 43k