Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
373
views
Comment: Comment: Why is DESeq2 normalization making my top feature have identical values across s
5 weeks ago by DNAngel ▴ 250
0
votes
1
reply
373
views
Comment: Comment: Why is DESeq2 normalization making my top feature have identical values across s
5 weeks ago by DNAngel ▴ 250
1
vote
3
replies
373
views
Why is DESeq2 normalization making my top feature have identical values across samples?
DESEQ2 WGCNA
5 weeks ago by DNAngel ▴ 250
0
votes
0
replies
133
views
Should I keep taxa that have 0 counts when calculating alpha diversity?
Shannon-Weiner
6 weeks ago by DNAngel ▴ 250
0
votes
0
replies
870
views
Comment: Comment: Samtools unmapped reads
15 months ago by DNAngel ▴ 250
0
votes
5
replies
870
views
Samtools unmapped reads
samtools
15 months ago by DNAngel ▴ 250
0
votes
0
replies
870
views
Comment: Comment: Samtools unmapped reads
15 months ago by DNAngel ▴ 250
0
votes
0
replies
1.1k
views
Comment: Comment: Samtools mapped and unmapped flags, what is the difference between the flags?
15 months ago by DNAngel ▴ 250
0
votes
1
reply
1.1k
views
Comment: Comment: Samtools mapped and unmapped flags, what is the difference between the flags?
15 months ago by DNAngel ▴ 250
0
votes
3
replies
1.1k
views
Samtools mapped and unmapped flags, what is the difference between the flags?
samtools
15 months ago by DNAngel ▴ 250
2
votes
2
replies
612
views
How do you get functional/biological role of motifs?
JASPAR
updated 16 months ago by 4.6k • written 16 months ago by ▴ 250
0
votes
1
reply
1.2k
views
Comment: Comment: How to get names and class information from a list of target IDs from the JASPAR
16 months ago by DNAngel ▴ 250
0
votes
1
reply
1.2k
views
Comment: Comment: How to get names and class information from a list of target IDs from the JASPAR
16 months ago by DNAngel ▴ 250
0
votes
2
replies
1.2k
views
Comment: Comment: How to get names and class information from a list of target IDs from the JASPAR
16 months ago by DNAngel ▴ 250
2
votes
8
replies
1.2k
views
How to get names and class information from a list of target IDs from the JASPAR database?
JASPAR
updated 16 months ago by 82k • written 16 months ago by ▴ 250
0
votes
0
replies
702
views
Comment: Comment: Program to detect cis-regulatory modules for a non model species?
18 months ago by DNAngel ▴ 250
0
votes
0
replies
702
views
Comment: Comment: Program to detect cis-regulatory modules for a non model species?
18 months ago by DNAngel ▴ 250
3
votes
3
replies
702
views
Program to detect cis-regulatory modules for a non model species?
factors transcription
18 months ago by DNAngel ▴ 250
0
votes
1
reply
806
views
Comment: Comment: How do you find transcription factors in a newly sequenced genome?
19 months ago by DNAngel ▴ 250
4
votes
3
replies
806
views
How do you find transcription factors in a newly sequenced genome?
interproscan factors transcription
updated 19 months ago by ▴ 20 • written 19 months ago by ▴ 250
1
vote
1
reply
1.0k
views
Comment: Comment: How do you obtain a list of transcription factors from a genome?
19 months ago by DNAngel ▴ 250
0
votes
1
reply
1.0k
views
Comment: Comment: How do you obtain a list of transcription factors from a genome?
19 months ago by DNAngel ▴ 250
0
votes
0
replies
1.0k
views
Comment: Comment: How do you obtain a list of transcription factors from a genome?
19 months ago by DNAngel ▴ 250
0
votes
1
reply
1.0k
views
Comment: Comment: How do you obtain a list of transcription factors from a genome?
19 months ago by DNAngel ▴ 250
7
votes
8
replies
1.0k
views
How do you obtain a list of transcription factors from a genome?
transcription-factor
updated 14 months ago by 43k • written 19 months ago by ▴ 250
0
votes
6
replies
2.0k
views
Confused about which database to use - nt or nr?
blast
updated 19 months ago by 11k • written 19 months ago by ▴ 250
0
votes
2
replies
697
views
What happened to the SparCC github repository?
sparcc
updated 2.1 years ago by ★ 2.0k • written 2.1 years ago by ▴ 250
0
votes
0
replies
4.7k
views
Comment: Comment: WGCNA exportNetworkToCytoscape issue!!
2.4 years ago by DNAngel ▴ 250
2
votes
8
replies
3.4k
views
Why does Kraken2 not produce taxon percentages with --report flag?
kraken2
updated 2.4 years ago by ▴ 100 • written 3.0 years ago by ▴ 250
0
votes
0
replies
622
views
Can I use DESeq2 to analyze my abundance dataset, which also happens to have a lot of zeros?
deseq2
2.6 years ago by DNAngel ▴ 250
0
votes
0
replies
2.2k
views
Comment: Comment: Is there really a difference in blastn -task blastn and -task megablast when dea
2.6 years ago by DNAngel ▴ 250
0
votes
1
reply
2.2k
views
Comment: Comment: Is there really a difference in blastn -task blastn and -task megablast when dea
2.6 years ago by DNAngel ▴ 250
0
votes
4
replies
2.2k
views
Forum: Is there really a difference in blastn -task blastn and -task megablast when dealing with unmapped reads?
blastn
2.6 years ago by DNAngel ▴ 250
0
votes
0
replies
1.4k
views
Comment: Comment: WGCNA, what does it mean if no hub genes are identified?
2.6 years ago by DNAngel ▴ 250
0
votes
1
reply
1.4k
views
Comment: Comment: WGCNA, what does it mean if no hub genes are identified?
2.6 years ago by DNAngel ▴ 250
2
votes
4
replies
1.4k
views
WGCNA, what does it mean if no hub genes are identified?
WGCNA
2.6 years ago by DNAngel ▴ 250
1
vote
0
replies
596
views
R package for determining best model transformation for a dataset?
R
2.7 years ago by DNAngel ▴ 250
0
votes
1
reply
3.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
2.7 years ago by DNAngel ▴ 250
0
votes
0
replies
3.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
2.7 years ago by DNAngel ▴ 250
0
votes
1
reply
3.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
2.7 years ago by DNAngel ▴ 250
0
votes
2
replies
3.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
2.7 years ago by DNAngel ▴ 250
0
votes
0
replies
3.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
2.7 years ago by DNAngel ▴ 250
11
votes
15
replies
3.5k
views
Output of samtools view, what does the third column actually represent?
samtools
updated 2.7 years ago by 19k • written 2.7 years ago by ▴ 250
0
votes
2
replies
3.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
2.7 years ago by DNAngel ▴ 250
0
votes
0
replies
575
views
How to find out how many reads were used in contig assembly in metaSPADES?
metaspades
2.7 years ago by DNAngel ▴ 250
1
vote
1
reply
1.7k
views
How do you interpret Tukey's significance when there is no group clustering alone?
Tukey
2.7 years ago by DNAngel ▴ 250
0
votes
0
replies
1.7k
views
Answer: Answer: How do you interpret Tukey's significance when there is no group clustering alon
2.7 years ago by DNAngel ▴ 250
1
vote
1
reply
1.3k
views
What is the difference between using -max_target_seqs 1 -max_hsps 1 versus just the defaults and then filtering for top hit?
blast
updated 2.7 years ago by 142k • written 2.7 years ago by ▴ 250
0
votes
0
replies
541
views
R vegdist does not compute distances for all my sites
vegan vegdist R
updated 2.7 years ago by 43k • written 2.7 years ago by ▴ 250
3
votes
1
reply
1.9k
views
What is the recommended contig length to filter?
metaspades
updated 2.8 years ago by ★ 27k • written 2.8 years ago by ▴ 250
198 results • Page 1 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6