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5
votes
6
replies
4.8k
views
genotype imputation pipeline
GWAS SNPs imputation
updated 2.7 years ago by 87k • written 7.7 years ago by ▴ 420
0
votes
2
replies
993
views
local ancestry in admixed populations
GWAS admixture
updated 2.3 years ago by • 0 • written 4.0 years ago by ▴ 420
0
votes
0
replies
1.2k
views
Comment: C: cell type specific enhancers
4.0 years ago by alessandrotestori7 ▴ 420
2
votes
6
replies
1.2k
views
cell type specific enhancers
enhancers
updated 4.0 years ago by 82k • written 4.0 years ago by ▴ 420
0
votes
0
replies
1.2k
views
Comment: C: cell type specific enhancers
4.0 years ago by alessandrotestori7 ▴ 420
0
votes
0
replies
1.2k
views
Comment: C: cell type specific enhancers
4.0 years ago by alessandrotestori7 ▴ 420
1
vote
1
reply
8.6k
views
Comment: C: Phasing with SHAPEIT
4.4 years ago by alessandrotestori7 ▴ 420
7
votes
1
reply
3.5k
views
Answer: C: GWAS - QC & Tutorials.
updated 4.4 years ago by 11k • written 4.5 years ago by ▴ 420
2
votes
4
replies
1.8k
views
Odds ratio confidence interval in meta-analysis
GWAS plink meta-analysis
updated 4.8 years ago by • 0 • written 6.3 years ago by ▴ 420
0
votes
0
replies
1.8k
views
Comment: C: Odds ratio confidence interval in meta-analysis
5.2 years ago by alessandrotestori7 ▴ 420
10
votes
10
replies
2.0k
views
Minor allele frequency
GWAS SNPs Alleles
updated 5.4 years ago by 20 • written 7.4 years ago by ▴ 420
7
votes
5
replies
7.8k
views
Cochran-Armitage test in R
R snp statistics
updated 5.8 years ago by 11k • written 7.2 years ago by ▴ 420
3
votes
6
replies
1.4k
views
association analysis with stratification
GWAS population stratification
updated 5.8 years ago by 20 • written 6.9 years ago by ▴ 420
0
votes
0
replies
7.1k
views
Comment: C: install Bioconductor package and its dependencies
6.0 years ago by alessandrotestori7 ▴ 420
0
votes
2
replies
7.1k
views
Comment: C: install Bioconductor package and its dependencies
updated 6.0 years ago by 47k • written 6.0 years ago by ▴ 420
7
votes
20
replies
7.1k
views
install Bioconductor package and its dependencies
Bioconductor R
updated 6.0 years ago by 35k • written 6.0 years ago by ▴ 420
2
votes
0
replies
4.0k
views
Comment: C: How to annotate repeats?
6.0 years ago by alessandrotestori7 ▴ 420
0
votes
0
replies
1.7k
views
Linkage Disequilibrium calculation
SNPs LD
6.2 years ago by alessandrotestori7 ▴ 420
0
votes
0
replies
1.9k
views
Comment: C: Internship in Genomics and Transcriptomics
6.2 years ago by alessandrotestori7 ▴ 420
0
votes
0
replies
8.9k
views
Comment: C: GWAS - approximate odds ratio and standard error
6.3 years ago by alessandrotestori7 ▴ 420
0
votes
1
reply
7.6k
views
Comment: C: Determine GO hierarchy in a list of GO terms
6.3 years ago by alessandrotestori7 ▴ 420
8
votes
6
replies
7.6k
views
Determine GO hierarchy in a list of GO terms
Gene Ontology
updated 6.3 years ago by 35k • written 6.3 years ago by ▴ 420
0
votes
0
replies
7.6k
views
Comment: C: Determine GO hierarchy in a list of GO terms
6.3 years ago by alessandrotestori7 ▴ 420
0
votes
0
replies
1.3k
views
Comment: C: Gene set analysis
6.3 years ago by alessandrotestori7 ▴ 420
3
votes
4
replies
1.3k
views
Gene set analysis
Genes Enrichment
updated 6.3 years ago by ★ 1.2k • written 6.3 years ago by ▴ 420
0
votes
0
replies
1.3k
views
Comment: C: Gene set analysis
6.3 years ago by alessandrotestori7 ▴ 420
0
votes
1
reply
1.5k
views
Loci identification through SNPs LD information
GWAS SNP
updated 6.3 years ago by 87k • written 6.3 years ago by ▴ 420
2
votes
1
reply
1.2k
views
problems with DEPICT software input
DEPICT gene enrichment
6.4 years ago by alessandrotestori7 ▴ 420
2
votes
0
replies
1.2k
views
Answer: A: problems with DEPICT software input
6.4 years ago by alessandrotestori7 ▴ 420
0
votes
0
replies
2.0k
views
Comment: C: Haplotype LD block without genotypes
6.4 years ago by alessandrotestori7 ▴ 420
2
votes
3
replies
2.0k
views
Haplotype LD block without genotypes
GWAS Haplotype LD
updated 6.4 years ago by ▴ 20 • written 6.4 years ago by ▴ 420
1
vote
1
reply
2.4k
views
GWAS conditional analysis
SNP GWAS
updated 6.5 years ago by 20 • written 6.6 years ago by ▴ 420
0
votes
1
reply
1.7k
views
Comment: C: Estimating association of SNPs to different traits
6.5 years ago by alessandrotestori7 ▴ 420
0
votes
1
reply
1.7k
views
Comment: C: Estimating association of SNPs to different traits
6.5 years ago by alessandrotestori7 ▴ 420
2
votes
5
replies
1.7k
views
Estimating association of SNPs to different traits
GWAS Summary statistics Pvalue
updated 6.5 years ago by 20 • written 6.5 years ago by ▴ 420
0
votes
0
replies
12k
views
Comment: C: Understanding Conditional analysis
6.5 years ago by alessandrotestori7 ▴ 420
0
votes
1
reply
8.9k
views
Comment: C: GWAS - approximate odds ratio and standard error
6.5 years ago by alessandrotestori7 ▴ 420
1
vote
1
reply
8.9k
views
Comment: C: GWAS - approximate odds ratio and standard error
6.5 years ago by alessandrotestori7 ▴ 420
5
votes
10
replies
8.9k
views
GWAS - approximate odds ratio and standard error
GWAS imputation
updated 6.5 years ago by 87k • written 6.5 years ago by ▴ 420
0
votes
1
reply
8.9k
views
Comment: C: GWAS - approximate odds ratio and standard error
6.5 years ago by alessandrotestori7 ▴ 420
0
votes
1
reply
8.9k
views
Comment: C: GWAS - approximate odds ratio and standard error
6.5 years ago by alessandrotestori7 ▴ 420
12
votes
9
replies
3.9k
views
retrieving from ExAC in VCF format
ExAC VCF
updated 6.7 years ago by ▴ 10 • written 6.7 years ago by ▴ 420
1
vote
0
replies
3.9k
views
Comment: C: retrieving from ExAC in VCF format
6.7 years ago by alessandrotestori7 ▴ 420
1
vote
0
replies
1.3k
views
conditinoal association analysis from summary statistics
GWAS conditional association analysis
6.8 years ago by alessandrotestori7 ▴ 420
1
vote
1
reply
1.4k
views
Comment: C: association analysis with stratification
6.9 years ago by alessandrotestori7 ▴ 420
1
vote
1
reply
2.2k
views
Comment: C: merge cases and controls with plink
6.9 years ago by alessandrotestori7 ▴ 420
9
votes
4
replies
2.2k
views
merge cases and controls with plink
GWAS plink
updated 6.9 years ago by 10k • written 6.9 years ago by ▴ 420
2
votes
4
replies
3.1k
views
Metal - the commnad you issued could not be processed
Meta-alanysis METAL GWAS
updated 7.0 years ago by ▴ 50 • written 7.4 years ago by ▴ 420
1
vote
0
replies
5.5k
views
Comment: C: estimating tumor purity and ploidy and CNV
7.2 years ago by alessandrotestori7 ▴ 420
1
vote
1
reply
7.8k
views
Comment: C: Cochran-Armitage test in R
7.2 years ago by alessandrotestori7 ▴ 420
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