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0
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5.6k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
3.2 years ago by seta ★ 1.9k
0
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0
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1.6k
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Comment: C: RNA-seq power estimation using ssizeRNA program
3.2 years ago by seta ★ 1.9k
5
votes
7
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1.6k
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RNA-seq power estimation using ssizeRNA program
power analysis RNA-seq ssizeRNA
updated 3.2 years ago by 87k • written 3.2 years ago by ★ 1.9k
0
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1
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1.6k
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Comment: C: RNA-seq power estimation using ssizeRNA program
3.2 years ago by seta ★ 1.9k
10
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8
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10k
views
10 follow
How to extract fasta sequences from assembled transcripts generated by Stringtie
fasta gtf stringtie
updated 13 months ago by 43k • written 7.0 years ago by ★ 1.9k
0
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0
replies
742
views
The same effect of SNPs in LD?
GWAS linkage disequilibrium effect size
3.4 years ago by seta ★ 1.9k
0
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0
replies
1.1k
views
PLINK beta coefficient
GWAS association beta coefficient PLINK
3.5 years ago by seta ★ 1.9k
1
vote
0
replies
1.1k
views
Linear mixed model for genome-wide association analysis
linear mixed model GWAS GCTA
updated 3.5 years ago by 20 • written 3.6 years ago by ★ 1.9k
2
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0
replies
1.6k
views
Comment: C: PLINK basic command line usage
3.6 years ago by seta ★ 1.9k
0
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0
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6.7k
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Comment: C: WGCNA soft-threshold power selection
3.6 years ago by seta ★ 1.9k
0
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0
replies
1.6k
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Comment: C: GWAS results and linkage disequilibrium issue
3.6 years ago by seta ★ 1.9k
0
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2
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1.6k
views
GWAS results and linkage disequilibrium issue
GWAS linkage disequilibrium LD risk score
3.6 years ago by seta ★ 1.9k
0
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1
reply
904
views
Comment: C: real time pcr primer design
3.6 years ago by seta ★ 1.9k
0
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0
replies
1.3k
views
Comment: C: edgeR normalization via TMM method
3.6 years ago by seta ★ 1.9k
2
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2
replies
1.3k
views
edgeR normalization via TMM method
RNA-Seq edgeR normalization TMM
updated 3.6 years ago by 82k • written 3.6 years ago by ★ 1.9k
0
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1
reply
7.9k
views
Comment: C: Why 'filterByExpr' does not eliminate low read counts from the expression data?
3.6 years ago by seta ★ 1.9k
5
votes
23
replies
2.6k
views
Please help with connecting the part of the header in a fasta file with another text file
programming fasta
updated 13 months ago by 43k • written 7.8 years ago by ★ 1.9k
27
votes
44
replies
15k
views
How to remove contamination from the transcriptome assembly
RNA-Seq contamination assembly blast Hiseq reads
updated 20 months ago by 43k • written 8.5 years ago by ★ 1.9k
0
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1
reply
1.8k
views
Comment: C: Please help about java error of BBDuk
3.6 years ago by seta ★ 1.9k
0
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5
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1.8k
views
Please help about java error of BBDuk
bbmap bbduk java brian bushnel
updated 3.1 years ago by 142k • written 3.6 years ago by ★ 1.9k
0
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1
reply
2.1k
views
Comment: C: Strange, FastQC doesn't work on windows, any suggestions?
3.6 years ago by seta ★ 1.9k
0
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0
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2.1k
views
Comment: C: Strange, FastQC doesn't work on windows, any suggestions?
3.6 years ago by seta ★ 1.9k
0
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5
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2.1k
views
Strange, FastQC doesn't work on windows, any suggestions?
Fastqc NGS
3.6 years ago by seta ★ 1.9k
0
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6
replies
1.6k
views
Microarray data normalization
RMA microarray normalization
updated 2.7 years ago by ▴ 80 • written 3.7 years ago by ★ 1.9k
0
votes
2
replies
861
views
Linear mixed model and GWAS analysis
gwas linear mixed model longitudinal cohort
3.8 years ago by seta ★ 1.9k
0
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1
reply
861
views
Comment: C: GWAS analysis using linear mixed model
3.8 years ago by seta ★ 1.9k
0
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0
replies
4.8k
views
Comment: C: Phenotype from plink fam file in gcta
3.8 years ago by seta ★ 1.9k
0
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0
replies
594
views
Physical interaction of long non-coding RNAs with target genes
target genes physical interaction lncRNA
3.8 years ago by seta ★ 1.9k
0
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0
replies
770
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Comment: C: Validation of protein-coding gene and lncRNA correlation
3.9 years ago by seta ★ 1.9k
0
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2
replies
770
views
Validation of protein-coding gene and lncRNA correlation
RNA-Seq correlation non-coding RNA lncRNA
updated 3.9 years ago by ★ 1.9k • written 3.9 years ago by ★ 1.9k
0
votes
0
replies
560
views
The gene expression effect of eQTL variants in high LD
eQTL variants GTEx database gene expression effect
updated 3.9 years ago by 20 • written 4.1 years ago by ★ 1.9k
4
votes
5
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7.6k
views
Read trimming with BBDuk
bbduk read trimming bbmap
updated 4.0 years ago by 20 • written 7.0 years ago by ★ 1.9k
2
votes
2
replies
726
views
Classification of long non-coding RNAs
lncRNA non-coding RNA
updated 4.0 years ago by 142k • written 4.0 years ago by ★ 1.9k
0
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0
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1.1k
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Comment: C: long-non coding RNA and protein-coding genes correlation
4.0 years ago by seta ★ 1.9k
0
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2
replies
1.1k
views
long-non coding RNA and protein-coding genes correlation
lncRNA RNA-seq correlation co-expression
updated 4.0 years ago by 8.7k • written 4.0 years ago by ★ 1.9k
1
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1
reply
1.3k
views
Comment: C: lncRNA differential expression analysis
4.0 years ago by seta ★ 1.9k
0
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1
reply
1.3k
views
Comment: C: lncRNA differential expression analysis
4.0 years ago by seta ★ 1.9k
0
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1
reply
1.3k
views
Comment: C: lncRNA differential expression analysis
4.0 years ago by seta ★ 1.9k
5
votes
7
replies
1.3k
views
lncRNA differential expression analysis
RNA-seq differential expression lncRNA
updated 19 months ago by 87k • written 4.0 years ago by ★ 1.9k
0
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1
reply
1.2k
views
Comment: C: DE lncRNA and mRNA correlation analysis
4.0 years ago by seta ★ 1.9k
0
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3
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1.2k
views
DE lncRNA and mRNA correlation analysis
lncRNA correlation analysi mRNA
4.0 years ago by seta ★ 1.9k
0
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1
reply
1.3k
views
Comment: C: microRNA-seq analysis from RNA-seq data
4.0 years ago by seta ★ 1.9k
0
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1
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1.3k
views
Comment: C: microRNA-seq analysis from RNA-seq data
4.0 years ago by seta ★ 1.9k
0
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1
reply
1.3k
views
Comment: C: microRNA-seq analysis from RNA-seq data
4.1 years ago by seta ★ 1.9k
0
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0
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5.8k
views
Comment: C: How to identify DE lncRNA from RNA Seq Data?
4.1 years ago by seta ★ 1.9k
1
vote
0
replies
23k
views
Comment: C: The RNA-Seq data input for WGCNA in terms of gene co-expression network construc
4.1 years ago by seta ★ 1.9k
0
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0
replies
1.7k
views
Comment: C: Mir-RNA analysis by RNA-seq data
4.1 years ago by seta ★ 1.9k
3
votes
8
replies
1.3k
views
microRNA-seq analysis from RNA-seq data
rna-seq small rna microrna long non-coding rna
updated 4.1 years ago by ▴ 310 • written 4.1 years ago by ★ 1.9k
0
votes
0
replies
676
views
Haplotype determination from a list of variants
haplotype SNP variant
4.1 years ago by seta ★ 1.9k
1
vote
1
reply
23k
views
Comment: C: The RNA-Seq data input for WGCNA in terms of gene co-expression network construc
4.1 years ago by seta ★ 1.9k
855 results • Page 2 of 18
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