This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Haplotype determination from a list of variants

Dear all,

I've got a list of variants on a given gene for determining the possible haplotypes. I found LDhap is useful, however, I'm not sure how it is determined, is it based on the linkage disequilibrium (LD)? which LD value threshold used for determining the haplotypes?

Many thanks for your comment and help.

haplotype snp variant

0 answers

No answers yet.

Log in to answer this question.