just now by
drajangirija
•
0
0
votes
0
replies
1
view
0
votes
0
replies
6
views
10 minutes ago by
lorena9132
•
0
0
votes
2
replies
43
views
30 minutes ago by
Expert
▴
10
0
votes
4
replies
130
views
updated 2 hours ago by
Mensur Dlakic
★
27k
•
written 9 hours ago by
Ruqaiya
•
0
0
votes
0
replies
24
views
3 hours ago by
Natali
•
0
0
votes
0
replies
29
views
0
votes
1
reply
74
views
0
votes
1
reply
101
views
1
vote
1
reply
971
views
updated 12 hours ago by
lcordeiro
▴
40
•
written 14 months ago by
Zhenyu Zhang
★
1.2k
0
votes
1
reply
185
views
updated 13 hours ago by
chrchang523
10k
•
written 4 days ago by
8armed
•
0
0
votes
5
replies
239
views
updated 13 hours ago by
chrchang523
10k
•
written 22 hours ago by
curious
▴
750
0
votes
0
replies
68
views
updated 7 hours ago by
Ram
43k
•
written 15 hours ago by
deepak180001
•
0
0
votes
1
reply
110
views
0
votes
1
reply
99
views
0
votes
1
reply
93
views
0
votes
6
replies
301
views
0
votes
1
reply
105
views
updated 18 hours ago by
swbarnes2
14k
•
written 18 hours ago by
kalavattam
▴
190
0
votes
1
reply
98
views
0
votes
0
replies
75
views
0
votes
0
replies
72
views
21 hours ago by
Javier
•
0
0
votes
1
reply
96
views
updated 7 hours ago by
Thanujay S
•
0
•
written 22 hours ago by
yahn
•
0
0
votes
0
replies
68
views
0
votes
0
replies
71
views
0
votes
2
replies
131
views
updated 21 hours ago by
GenoMax
142k
•
written 23 hours ago by
ahmad.sajad4541
•
0
9
votes
9
replies
476
views
updated 21 hours ago by
dsull
★
6.0k
•
written 5 days ago by
carolofharvest
▴
30
0
votes
2
replies
150
views
2
votes
3
replies
205
views
0
votes
0
replies
95
views
3
votes
5
replies
258
views
0
votes
6
replies
272
views
5
votes
5
replies
555
views
updated 18 hours ago by
Mbofire
•
0
•
written 9 days ago by
Ming Tommy Tang
★
3.9k
1
vote
6
replies
328
views
4
votes
15
replies
1.6k
views
updated 9 hours ago by
Gordon Smyth
★
7.1k
•
written 4 months ago by
raplayer
▴
10
4
votes
9
replies
2.1k
views
6 follow
2
votes
2
replies
1.8k
views
updated 19 hours ago by
e.r.zakiev
▴
210
•
written 3.8 years ago by
n.anuragsharma
▴
40
2
votes
2
replies
2.6k
views
Recent Votes
Recent Locations •
All
Colombia, 1 minute ago
India, 5 minutes ago
France, 5 minutes ago
Moscow, 17 minutes ago
Estonia, 18 minutes ago
USA, 20 minutes ago
Türkiye, 24 minutes ago
Recent Awards •
All
Popular Question to
drajangirija
•
0
Popular Question to
Thanujay S
•
0
Popular Question to
SHN
▴
40
Popular Question to
Rob
▴
170
Popular Question to
curious
▴
750
Popular Question to
M.
▴
30
Recent Replies
Comment: creating batch colum for batch correction
by
Expert
▴
10
Thank you for your response. These samples were collected from the same patient at different time points(day 0, 8 and 18) and these are ind…
Comment: creating batch colum for batch correction
by
ATpoint
82k
Not sure I follow. Can you first of all describe which comparisons you want to make, pretending there was no batch effect at all. Write dow…
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
Thank you for the advice, i'll keep that in mind.
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
I am trying to reproduce some bioinformatics data from a research paper-[this paper][1] as i was asked to work on an MRSA bioinfo project, …
Answer: Segmentation error while using a tool
by
Mensur Dlakic
★
27k
Most likely you didn't do anything wrong. Going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack of…
Comment: Segmentation error while using a tool
by
Thanujay S
•
0
Hey @Ruqaiya!
Can you please give more details on why smalt is opted here?
According to what I can see, the tool has become obsolete! Why …
Comment: Extracting mutation status from MAF files - TCGA
by
Thanujay S
•
0
Hey! Can you explain the question further? What have you tried?
Comment: Downloading older version of a tool
by
Ruqaiya
•
0
I tried the 2nd option only.
I got the files of older version from the author but that version isn't working on my WSL, it's showing Segmen…
Comment: filtering before dada2
by
GenoMax
142k
> I encountered a significant decrease in the percentage of merged reads.
You can check with `bbmerge.sh` from BBMap suite to see how many…
Comment: HCL database download
by
GenoMax
142k
Isn't the download link available above the plot: http://bis.zju.edu.cn/HCL/data/DGE/Adult-Transverse-Colon1_dge.txt.gz
Comment: fastq screen aligner no specified.
by
GenoMax
142k
You need to change this configuration file to point it to the location where the aligner executable can be found.
So as an example followi…
Answer: Design matrix Differential expression analysis
by
Gordon Smyth
★
7.1k
The expression levels do not change but the way that you have parametrized the expression levels does change.
The two design matrices give…
Comment: The GDC Legacy Archive is retiring soon.
by
lcordeiro
▴
40
Hi Zhenyu, do you happen to know how I can download metadata for some of the legacy files? I downloaded several IDATs from the legacy data …
Answer: Force PLINK2 to neglect chrX as the sex chromosome
by
chrchang523
10k
(cross-posted from https://groups.google.com/g/plink2-users/c/Qphx_6BpPII )
You need to use --chr-set, not --allow-extra-chr, to specify…
Traffic: 1881 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6