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> Not every read in your data is going to match a guide.
That is also true for sure. Let me clarify what I mean. For every read you should…
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Use `samtools view ` for this conversion. See discussion in https://www.biostars.org/p/9592860/
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No that was only from Breast cancer. You could try selecting all data and see if you are able to see all treatments in the set.
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I don't think every guide is supposed to show up in these experiments as far as I have seen. You will get some guides with 0 counts as you …
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Interesting! Thank you for such a quick response!
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See answer here: https://www.biostars.org/p/9494503/#9494619
Heng Li said: https://twitter.com/lh3lh3/status/1410375781340135424
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