0
votes
2
replies
195
views
0
votes
0
replies
34
views
0
votes
1
reply
69
views
updated 3 hours ago by
ATpoint
82k
•
written 8 hours ago by
KHURRAM SHAHZAD
•
0
0
votes
1
reply
56
views
0
votes
0
replies
45
views
0
votes
0
replies
49
views
7 hours ago by
Rodolfo Adrián
•
0
1
vote
6
replies
1.4k
views
updated 8 hours ago by
scideas
▴
30
•
written 8 months ago by
rohitsatyam102
▴
870
1
vote
2
replies
648
views
updated 10 hours ago by
Muhammad
•
0
•
written 2.6 years ago by
mari.johnson
•
0
1
vote
1
reply
274
views
0
votes
0
replies
79
views
updated 21 hours ago by
Pierre Lindenbaum
161k
•
written 21 hours ago by
Mohamed Samir
▴
20
2
votes
1
reply
192
views
updated 15 hours ago by
Gordon Smyth
★
7.2k
•
written 1 day ago by
marineandriot
•
0
1
vote
1
reply
162
views
1
vote
16
replies
738
views
updated 23 hours ago by
GenoMax
142k
•
written 3 days ago by
hophuquy0944
•
0
0
votes
2
replies
299
views
updated 16 hours ago by
anton.i.petrov
•
0
•
written 3 months ago by
Larissa
•
0
2
votes
9
replies
1.0k
views
just now by
LauferVA
4.2k
Recent Votes
Recent Locations •
All
India, just now
Australia, 6 minutes ago
London, United Kingdom, 8 minutes ago
United States, 8 minutes ago
Spain, 10 minutes ago
South Korea, 11 minutes ago
Spain, 12 minutes ago
Recent Awards •
All
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
scideas
▴
30
Popular Question to
Muhammad
•
0
Popular Question to
synat.keam
▴
100
Popular Question to
syedahamdani94
•
0
Popular Question to
mohammadhassanj
▴
260
Recent Replies
Answer: Design for complex RNA-Seq experiment using Deseq2
by
Ezequiel
•
0
I completely agree with most points. The PCA shows that the biggest driver of difference is the patients themselves, with PRE and POST time…
Comment: Add stats to the plot
by
marco.barr
▴
130
Hi, you can add statistical annotations using `ggpubr` function `stat_pvalue_manual `. You need to make sure you calculate the p-values fir…
Answer: seqtk subseq in.fastq list.txt > out.fastq not extracting full sequence from
by
ATpoint
82k
Use everything before the whitespace in list.txt, for example `A00869:294:HCW57DSXY:2:1101:3929:1000` and not `A00869:294:HCW57DSXY:2:1101:…
Answer: CellRanger output more cells than specified using --force-cells? Why?
by
scideas
▴
30
I actually had this same issue with CellRanger v7- turns out that since you have 2 species in your mapping reference, CellRanger is forcing…
Answer: Checking chromosome builds for genotyping data
by
Muhammad
•
0
Assume you have genotype data in Plink format. (G.bed, G.bim, G.fam)
Download some reference panel data in Plink format (R.bed, R.bim, R.f…
Comment: Error in CIBERSORTx ($ operator is invalid for atomic vectors)
by
nguyenn6
•
0
did you ever figure it out? i'm having the same issue.
Comment: Traveler with Infernal mapping failed
by
anton.i.petrov
•
0
Hi Larissa! I am the lead developer of R2DT and I've just noticed this question. Could you please email help@r2dt.bio with your input seque…
Comment: constructing pangenome through psvcp
by
analyst
▴
50
Fixed the issue by updating nucmer version.
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
GenoMax
142k
Can you create a small test database (`makeblastdb`) from your query file and try to run the search against the same file and see if that w…
Comment: calculating genomic coverage/ base overlap in R
by
1769mkc
★
1.2k
you can `dput(head(df)` for the both the data frame so that other can test for possible solutions
Comment: Help with Biopython for Beginner
by
Joe
21k
One question before offering more solutions: are you trying to learn Python with this as an example problem, or are you trying to find the …
Answer: RNAseq coverage vs depth for transcript isoform expression?
by
Gordon Smyth
★
7.2k
See the exploration of isoform estimation precision vs read length and sequencing depth in our paper: https://doi.org/10.1093/nar/gkad1167.…
Comment: How to handle duplicated genes in TCGA data?
by
txema.heredia
▴
130
Why does the tool require gene symbols and not ensembl ids? Is it retrieving information from somewhere else? If so, your best bet is to fi…
Comment: how to treat the replicates while performing WGCNA
by
mavy
▴
10
Thank you so much for your response . Really appreciate it.
I will try the way you mentioned and will get back if I have any query
Traffic: 1412 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6