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Tool: Sequence alignment on split read event such as inversion, duplication and complex nested events.

Hello!

I just built a new long-read aligner for aligning complex genomic rearrangements such as CNV, INV, TRA, etc. (https://github.com/micahvista/VACmap) It's still in early development, can you guys give me some suggestions? It will be very very helpful! I also build a dash app to play with http://64.64.240.35:8050/.

Thanks

minimap alignment ngmlr
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written by micah • micah

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