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119
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Confused about the results of a function in dada2 pipeline sample inference step
Microbiome R dada2
5 weeks ago by Mohamed Samir ▴ 20
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1
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631
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Comment: Comment: No hits for influenza virus in an RNA seq. data using FAST Q screen (from babrah
7 months ago by Mohamed Samir ▴ 20
1
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3
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631
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No hits for influenza virus in an RNA seq. data using FAST Q screen (from babraham institute)
alignment Linux mapping
updated 7 months ago by ▴ 410 • written 7 months ago by ▴ 20
2
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5
replies
837
views
6 follow
How to loop over certain files within a directory that belongs to certain samples
shell fastq
updated 9 months ago by 43k • written 9 months ago by ▴ 20
0
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0
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624
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Try to understand better how to set out an effective sample size within the MetagenomSeq package in microbiome
Microbiome
updated 9 months ago by 43k • written 9 months ago by ▴ 20
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0
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852
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Comment: Comment: calculating read depth via a for in loop over many fastq files ?
10 months ago by Mohamed Samir ▴ 20
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4
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852
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calculating read depth via a for in loop over many fastq files ?
Linux R bash
10 months ago by Mohamed Samir ▴ 20
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0
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713
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Comment: Comment: How to create a series of descending string in a column in data frame in R
10 months ago by Mohamed Samir ▴ 20
2
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5
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713
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How to create a series of descending string in a column in data frame in R
R
updated 10 months ago by ★ 2.0k • written 10 months ago by ▴ 20
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1
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713
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Comment: Comment: How to create a series of descending string in a column in data frame in R
10 months ago by Mohamed Samir ▴ 20
1
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2
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1.9k
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Salmon quant produced an error
Salmon Linux
updated 4 months ago by ▴ 10 • written 2.9 years ago by ▴ 20
4
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10
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2.5k
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Sorting of a bam file takes toooo long time
linux bam
updated 14 months ago by 43k • written 2.9 years ago by ▴ 20
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1
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2.5k
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Answer: Answer: Sorting of a bam file takes toooo long time
updated 2.9 years ago by 43k • written 2.9 years ago by ▴ 20
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2
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2.5k
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Comment: Comment: Sorting of a bam file takes toooo long time
2.9 years ago by Mohamed Samir ▴ 20
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1
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2.5k
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Comment: Comment: Sorting of a bam file takes toooo long time
2.9 years ago by Mohamed Samir ▴ 20
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