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Answer:
A: gVCF files from 1000 Genomes samples
3.5 years ago by
donfreed
★ 1.6k
1
vote
1
reply
941
views
Answer:
A: Error-prone human genomic sequence data from Illumina sequencing platform
3.7 years ago by
donfreed
★ 1.6k
1
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0
replies
2.8k
views
Answer:
A: Pipeline for analysing multiple tumor/normal exome samples
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
donfreed
★ 1.6k
0
votes
0
replies
2.3k
views
Answer:
A: Identifying mutations from Paired-End Sequencing data
updated 4.3 years ago by
Ram
43k • written 10.0 years ago by
donfreed
★ 1.6k
0
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0
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2.4k
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Answer:
A: Genotype Calling
updated 4.4 years ago by
Ram
43k • written 10.0 years ago by
donfreed
★ 1.6k
2
votes
0
replies
2.5k
views
Answer:
A: Coding postions for genes in RefSeq
updated 4.4 years ago by
Ram
43k • written 10.0 years ago by
donfreed
★ 1.6k
0
votes
1
reply
6.0k
views
Answer:
A: CNVnator installation error
updated 4.4 years ago by
Ram
43k • written 8.3 years ago by
donfreed
★ 1.6k
3
votes
2
replies
3.4k
views
Answer:
A: Can germline vs somatic variants be distinguished by phasing when no control is
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
donfreed
★ 1.6k
44
votes
2
replies
56k
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Answer:
A: What are chimeric reads?
updated 4.5 years ago by
Ram
43k • written 9.5 years ago by
donfreed
★ 1.6k
3
votes
1
reply
3.2k
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Answer:
A: how to distinguish mosaicism out of germline de novo mutations
6.2 years ago by
donfreed
★ 1.6k
1
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0
replies
3.9k
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Answer:
A: Mutect 2 on WGS data takes too long to run
6.7 years ago by
donfreed
★ 1.6k
1
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1
reply
3.4k
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Answer:
A: How to find variants that are common in one population but rare in others (popul
7.3 years ago by
donfreed
★ 1.6k
2
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0
replies
2.2k
views
Answer:
Answer: A command line option for region in GenotypeGVCFs?
updated 21 months ago by
Ram
43k • written 8.2 years ago by
donfreed
★ 1.6k
1
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0
replies
1.7k
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Answer:
A: Algorithm to find PL indicies containing a specific allele
8.2 years ago by
donfreed
★ 1.6k
0
votes
1
reply
6.5k
views
Answer:
A: bwa mem runs slowly the first time
8.9 years ago by
donfreed
★ 1.6k
6
votes
0
replies
4.1k
views
Answer:
Answer: Phasing trios for identification of denovo variants
updated 15 months ago by
Ram
43k • written 8.9 years ago by
donfreed
★ 1.6k
1
vote
1
reply
4.1k
views
Answer:
A: What are most recommended / state-of-the-art whole genome FASTQ datasets for ben
9.0 years ago by
donfreed
★ 1.6k
0
votes
0
replies
3.3k
views
Answer:
Answer: Unaligning BAM files
updated 23 months ago by
Ram
43k • written 9.1 years ago by
donfreed
★ 1.6k
2
votes
0
replies
3.2k
views
Answer:
Answer: Getting started with NGS analysis, common issues?
updated 2.0 years ago by
Ram
43k • written 9.2 years ago by
donfreed
★ 1.6k
3
votes
1
reply
3.1k
views
Answer:
Answer: Get Reference file from BAM
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
donfreed
★ 1.6k
5
votes
0
replies
7.9k
views
Answer:
Answer: Validated CNV dataset for NA12878
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
donfreed
★ 1.6k
1
vote
1
reply
1.6k
views
Answer:
Answer: Dot mark in 1000 genome project
updated 2.1 years ago by
Ram
43k • written 9.4 years ago by
donfreed
★ 1.6k
2
votes
0
replies
3.8k
views
Answer:
Answer: What is appropriate coverage/quality filter for GATK for germline variants?
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
donfreed
★ 1.6k
5
votes
1
reply
6.1k
views
Answer:
Answer: Do freeBayes and platypus support gVCF (ie incremental variant calling for large
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
donfreed
★ 1.6k
6
votes
0
replies
130k
views
Answer:
Answer: from .BAM to .BAI using samtools
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
donfreed
★ 1.6k
4
votes
0
replies
5.5k
views
Answer:
Answer: Haplotype frequencies from 1000 genomes
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
donfreed
★ 1.6k
3
votes
2
replies
9.4k
views
Answer:
A: Is it possible to reconstruct alignment from CIGAR and MD strings alone?
9.6 years ago by
donfreed
★ 1.6k
1
vote
3
replies
3.8k
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Answer:
A: How to distinguish between noise and a real low frequency substitution?
9.6 years ago by
donfreed
★ 1.6k
1
vote
0
replies
2.9k
views
Answer:
A: Reproducible Science Short Example
9.7 years ago by
donfreed
★ 1.6k
2
votes
0
replies
2.1k
views
Answer:
Answer: python subprocesses and wrappers for Jce tool
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
donfreed
★ 1.6k
0
votes
1
reply
2.2k
views
Answer:
Answer: Heteroplasmy detection program
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
donfreed
★ 1.6k
12
votes
0
replies
42k
views
Answer:
Answer: What read lengths are produced by modern Illumina sequencers?
updated 2.3 years ago by
Ram
43k • written 9.9 years ago by
donfreed
★ 1.6k
2
votes
1
reply
2.4k
views
Answer:
A: Translation Of Graph Theory Into Experimental Verification
updated 10.1 years ago by
Ashutosh Pandey
12k • written 10.1 years ago by
donfreed
★ 1.6k
2
votes
0
replies
6.5k
views
Answer:
A: Practice Of Filtering Vcf Files (From Gatk)
10.2 years ago by
donfreed
★ 1.6k
1
vote
1
reply
2.9k
views
Answer:
A: Total Samples In 1000 Genomes Vcf File
10.3 years ago by
donfreed
★ 1.6k
1
vote
0
replies
6.1k
views
Answer:
A: Best Way To Learn Bioinformatics For System Level Programmers.
10.3 years ago by
donfreed
★ 1.6k
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