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495
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How to plot the gap distribution of contigs wrt to reference genome
minia distribution minimap2 fasta plot
2.7 years ago by Ashi ▴ 20
2
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1
reply
590
views
How to create a new file containing contigs of a certain length from another contigs file
fasta minia
updated 13 months ago by 43k • written 2.7 years ago by ▴ 20
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1
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659
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How to find the co ordinates of long reads (simulated by Badreads) with respect to the reference genome
long-reads reference-genome assembly
updated 4 weeks ago by 43k • written 2.7 years ago by ▴ 20
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0
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897
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Comment: Comment: Error while installing Minia on Linux
2.9 years ago by Ashi ▴ 20
4
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3
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897
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Error while installing Minia on Linux
minia install error linux
2.9 years ago by Ashi ▴ 20
3
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2
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801
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How to know the positions of contigs in a reference genome
mapping positions alignment reference genome contigs
updated 2.9 years ago by 142k • written 2.9 years ago by ▴ 20
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0
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22k
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Comment: C: Tool for calculating sequence statistic values (e.g. N50) for multiple bins
3.2 years ago by Ashi ▴ 20
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1
reply
2.6k
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Comment: C: How to count frequency of kmers for different values of k from fasta file
3.3 years ago by Ashi ▴ 20
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1
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2.6k
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Comment: C: How to count frequency of kmers for different values of k from fasta file
3.3 years ago by Ashi ▴ 20
0
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1
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2.6k
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Comment: C: How to count frequency of kmers for different values of k from fasta file
updated 3.3 years ago by 142k • written 3.3 years ago by ▴ 20
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0
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2.6k
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Comment: C: How to count frequency of kmers for different values of k from fasta file
3.3 years ago by Ashi ▴ 20
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1
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2.6k
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Comment: C: How to count frequency of kmers for different values of k from fasta file
3.3 years ago by Ashi ▴ 20
0
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12
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2.6k
views
How to count frequency of kmers for different values of k from fasta file
fasta kmers count frequency genome
updated 3.3 years ago by 142k • written 3.3 years ago by ▴ 20
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0
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1.2k
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Comment: C: How does long reads help in the repeated regions of the genome
3.6 years ago by Ashi ▴ 20
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1.2k
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Comment: C: How does long reads help in the repeated regions of the genome
3.6 years ago by Ashi ▴ 20
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4
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1.2k
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How does long reads help in the repeated regions of the genome
Illumina short-reads long-reads ONT
updated 11 months ago by 43k • written 3.6 years ago by ▴ 20
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0
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771
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How to find all positions of one particular contig to which the short reads have been mapped?
bwa sam mapping longreads shortreads
3.8 years ago by Ashi ▴ 20
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0
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618
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How to check contiguity of reads mapped in BWA
Long-reads contiguity mapping BWA
updated 13 months ago by 43k • written 3.8 years ago by ▴ 20
1
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1
reply
1.6k
views
What are best Long read simulator generating Oxford Nanopore Reads
Long-reads Simulator ONT
updated 11 months ago by 43k • written 3.8 years ago by ▴ 20
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1
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765
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Comment: C: How to see set of short reads mapped to a particular long read
3.8 years ago by Ashi ▴ 20
3
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4
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765
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How to see set of short reads mapped to a particular long read
Mapping BWA
updated 11 months ago by 43k • written 3.8 years ago by ▴ 20
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0
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1.1k
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Comment: C: How to find mapped regions in the reference genome
3.9 years ago by Ashi ▴ 20
0
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1
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1.1k
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Comment: C: How to find mapped regions in the reference genome
3.9 years ago by Ashi ▴ 20
0
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4
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1.1k
views
How to find mapped regions in the reference genome
alignment sequencing genome LongReads BWA
3.9 years ago by Ashi ▴ 20
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