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SupBioInformatics
SupBioInformatics
Reputation:
70 (New)
Joined:
6.5 years ago
Last seen:
5.9 years ago
Latest posts by user
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Comment: C: Can I still detect ambient RNA if I do not have filtered gene-barcode matrix?
written by SupBioInformatics 7
0 votes
2 replies
2.5K views
Can I still detect ambient RNA if I do not have filtered gene-barcode matrix?
ambient rna soupx scrna-seq single-cell
updated by Friederike 905 • | written by SupBioInformatics 7
2 votes
1 reply
2.5K views
How to QC single-cell RNAseq data for tumor samples if data is right skewed?
scrna qc distribution single-cell
written by SupBioInformatics 7
1 vote
2 replies
4.8K views
How to use "SingleR" on the marker genes from `FindAllMarkers` for each cluster?
singler seurat scrnaseq scrna
updated by andynkili 1 • | written by SupBioInformatics 7
1 vote
1 reply
8.5K views
Should I normalize individually or after merging all the data?
scrna normalization seurat scale qc
updated by Picasa 71 • | written by SupBioInformatics 7
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2 replies
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Comment: C: What is the best practice of scRNA workflow for multiple patients and samples us
written by SupBioInformatics 7
0 votes
1 reply
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Comment: C: What is the best practice of scRNA workflow for multiple patients and samples us
written by SupBioInformatics 7
2 votes
8 replies
9.2K views
What is the best practice of scRNA workflow for multiple patients and samples using Seurat
scrna sing-cell rna seurat integrate
updated by GiV17 5 • | written by SupBioInformatics 7
0 votes
0 replies
1.3K views
What are advantages to use globaltest, ORA and GSVA algorithms using different enrichment methods
rna-seq enrichment algorithm
written by SupBioInformatics 7
0 votes
1 reply
58 views
How to calculate 'fold change' if the data is already normalized by log2
foldchange rna-seq log2
written by SupBioInformatics 7
0 votes
1 reply
144 views
How to deal with two gene sets have exact same values from GSVA results?
rna-seq gsva gsea pathways
written by SupBioInformatics 7
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0 replies
0 views
Comment: C: How to extract all pathways and corresponding compounds/genes from Reactome data
written by SupBioInformatics 7
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1 reply
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Comment: C: How to extract all pathways and corresponding compounds/genes from Reactome data
written by SupBioInformatics 7
0 votes
4 replies
137 views
How to extract all pathways and corresponding compounds/genes from Reactome database
pathways reactome r
written by SupBioInformatics 7
0 votes
0 replies
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Comment: C: How to calculate foldchange for log2'd expression data?
written by SupBioInformatics 7
1 vote
2 replies
2.1K views
How to calculate foldchange for log2'd expression data?
fold-change t-test
updated by Ram 4.5K • | written by SupBioInformatics 7
0 votes
0 replies
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Comment: C: How to perform enrichment (overrepresentation) using custom path sets in R
written by SupBioInformatics 7
0 votes
2 replies
121 views
How to perform enrichment (overrepresentation) using custom path sets in R
enrichment pathway r metabolites
written by SupBioInformatics 7
0 votes
0 replies
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Comment: C: Salary insights for Bioinformatics Data Analyst at clinical research lab in Bost
written by SupBioInformatics 7
0 votes
0 replies
0 views
Comment: C: Salary insights for Bioinformatics Data Analyst at clinical research lab in Bost
written by SupBioInformatics 7
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