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j.lunger18
j.lunger18
Reputation:
30
Joined:
6.9 years ago
Last seen:
5.4 years ago
Latest posts by user
0 votes
1 reply
1.6K views
ANNOVAR doesn't recognize multiple variants at single locus
snps annovar snpeff snvs
updated by desouzareis.r desouzareis.r • written by j.lunger18 • j.lunger18
0 votes
0 replies
1.0K views
Bulk small RNA self-complementarity tool
rna mfold
written by j.lunger18 • j.lunger18
0 votes
1 reply
0 views
Comment: C: Understanding TCGA somatic mutation files
written by j.lunger18 • j.lunger18
0 votes
0 replies
0 views
Comment: C: bcftools merge single-sample vcf files
written by j.lunger18 • j.lunger18
0 votes
3 replies
1.7K views
Understanding TCGA somatic mutation files
tcga snps vcf maf
updated by Kevin Blighe Kevin Blighe • written by j.lunger18 • j.lunger18
0 votes
2 replies
1.8K views
bcftools merge single-sample vcf files
bcftools vcf snp
updated by WouterDeCoster WouterDeCoster • written by j.lunger18 • j.lunger18
0 votes
1 reply
0 views
Comment: C: gnomAD reports variants with "NA" allele count and allele frequency
written by j.lunger18 • j.lunger18
2 votes
3 replies
1.9K views
gnomAD reports variants with "NA" allele count and allele frequency
gnomad snps vcf
updated by jon.klonowski jon.klonowski • written by j.lunger18 • j.lunger18
0 votes
1 reply
1.4K views
Merge vcf files from the four variant callers from TCGA
vcf tcga snp
updated by Kevin Blighe Kevin Blighe • written by j.lunger18 • j.lunger18
0 votes
1 reply
1.8K views
Best tool to merge .vcf files from different variant callers?
vcf gatk annotation variants snp
updated by Biostar Biostar • written by j.lunger18 • j.lunger18
0 votes
0 replies
1.1K views
Reference genome for snpEff
snpeff vcf assembly
written by j.lunger18 • j.lunger18
0 votes
1 reply
0 views
Comment: C: snpEff killed while reading genome version
written by j.lunger18 • j.lunger18
0 votes
3 replies
2.1K views
snpEff killed while reading genome version
snpeff snp
updated by aswanikrishnap1994 • aswanikrishnap1994 • written by j.lunger18 • j.lunger18
0 votes
1 reply
0 views
Comment: C: Fix or remove format tag in .vcf file
written by j.lunger18 • j.lunger18
0 votes
3 replies
5.4K views
Fix or remove format tag in .vcf file
vcf bcftools samtools
updated by Pierre Lindenbaum Pierre Lindenbaum • written by j.lunger18 • j.lunger18
0 votes
1 reply
0 views
Comment: C: Merge vcf files with bcftools
written by j.lunger18 • j.lunger18
0 votes
4 replies
2.9K views
Merge vcf files with bcftools
bcftools samtools
written by j.lunger18 • j.lunger18
0 votes
1 reply
1.4K views
Download non-cancer subset from gnomAD
gnomad vcf variants mutations snv
written by j.lunger18 • j.lunger18
0 votes
1 reply
1.5K views
Color Mutation Graph with Trackviewer
trackviewer r lolliplot
updated by qiuworld.ou qiuworld.ou • written by j.lunger18 • j.lunger18
0 votes
2 replies
2.0K views
Pipe output from curl to tabix to slice .vcf file
vcf tabix curl
updated by Biostar Biostar • written by j.lunger18 • j.lunger18
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