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0
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replies
484
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Comment:
Comment: Genes with multiple chromosome locations
8 weeks ago by
Pac314
▴ 10
2
votes
3
replies
484
views
Genes with multiple chromosome locations
gene
annotation
loci
alternative
updated 8 weeks ago by
Alex Reynolds
35k • written 8 weeks ago by
Pac314
▴ 10
0
votes
0
replies
148
views
eCLIP barcode extraction
eCLIP
barcodes
randomer
11 weeks ago by
Pac314
▴ 10
2
votes
3
replies
772
views
6 follow
Ambient RNA expression correction
scRNAseq
SoupX
Seurat
updated 9 months ago by
pankaj.agarwal.duke
▴ 30 • written 11 months ago by
Pac314
▴ 10
0
votes
0
replies
285
views
How to use a design matrix with two control levels in DESeq2
design_matrix
contrast
DESeq2
12 months ago by
Pac314
▴ 10
0
votes
0
replies
935
views
Comment:
Comment: Testing overlap significance of three gene sets using the hypergeometric distrib
12 months ago by
Pac314
▴ 10
4
votes
3
replies
935
views
Testing overlap significance of three gene sets using the hypergeometric distribution
Hypergeometric-distribution
gene-sets
12 months ago by
Pac314
▴ 10
0
votes
0
replies
2.4k
views
Comment:
Comment: collapsePathways function throwing error
13 months ago by
Pac314
▴ 10
0
votes
1
reply
2.4k
views
Comment:
Comment: collapsePathways function throwing error
13 months ago by
Pac314
▴ 10
0
votes
7
replies
2.4k
views
collapsePathways function throwing error
GSEA
fgsea
R
updated 10 weeks ago by
Tianxia
• 0 • written 13 months ago by
Pac314
▴ 10
0
votes
4
replies
941
views
SV with identical start and end positions
variants
strucural
VCF
updated 20 months ago by
d-cameron
★ 2.9k • written 20 months ago by
Pac314
▴ 10
0
votes
1
reply
941
views
Comment:
Comment: SV with identical start and end positions
20 months ago by
Pac314
▴ 10
0
votes
1
reply
704
views
Comment:
Comment: VEP annnotation on millions of variants
22 months ago by
Pac314
▴ 10
2
votes
3
replies
704
views
VEP annnotation on millions of variants
variants
VCF
annotation
VEP
updated 22 months ago by
Pierre Lindenbaum
161k • written 22 months ago by
Pac314
▴ 10
0
votes
0
replies
541
views
Comment:
Comment: Multi-allelic sites in Identity-by-descent tract detection
22 months ago by
Pac314
▴ 10
1
vote
2
replies
541
views
Multi-allelic sites in Identity-by-descent tract detection
IBIS
IBD
Vartiant
VCF
PLINK
22 months ago by
Pac314
▴ 10
0
votes
0
replies
1.3k
views
Comment:
Comment: GATK RealignerTargetCreator: IllegalArgumentException: Dictionary cannot have si
2.4 years ago by
Pac314
▴ 10
0
votes
1
reply
1.3k
views
Comment:
Comment: GATK RealignerTargetCreator: IllegalArgumentException: Dictionary cannot have si
2.4 years ago by
Pac314
▴ 10
0
votes
4
replies
1.3k
views
GATK RealignerTargetCreator: IllegalArgumentException: Dictionary cannot have size zero
Java
variant
GATK
calling
2.4 years ago by
Pac314
▴ 10
0
votes
1
reply
1.0k
views
Comment:
Comment: Error at parsing .tlst line (invalid strand): 3210 PGSC0003DMT400030180 ST4.03c
2.5 years ago by
Pac314
▴ 10
1
vote
3
replies
1.0k
views
Error at parsing .tlst line (invalid strand): 3210 PGSC0003DMT400030180 ST4.03ch12. 56298573-56298656
RNASeq
GFF
transcriptome
TopHat
updated 2.5 years ago by
skbrimer
▴ 740 • written 2.5 years ago by
Pac314
▴ 10
0
votes
0
replies
832
views
Masurca hybrid assembly throwing Error correction of PE reads failed error
assembly
genome
3.2 years ago by
Pac314
▴ 10
0
votes
1
reply
1.5k
views
Mixed Illumina Methylation data from EPIC and 450k
epigenetics
DNA methylation
minfi
updated 3.3 years ago by
Biostar
20 • written 3.4 years ago by
Pac314
▴ 10
0
votes
0
replies
760
views
Comment:
C: Running STAR on multiple replicates
3.4 years ago by
Pac314
▴ 10
2
votes
3
replies
760
views
Running STAR on multiple replicates
RNA-Seq
updated 3.4 years ago by
swbarnes2
14k • written 3.4 years ago by
Pac314
▴ 10
0
votes
0
replies
4.4k
views
Comment:
C: Is trimming necessary for RNAseq?
3.5 years ago by
Pac314
▴ 10
0
votes
2
replies
4.4k
views
Comment:
C: Is trimming necessary for RNAseq?
3.5 years ago by
Pac314
▴ 10
0
votes
0
replies
4.4k
views
Comment:
C: Is trimming necessary for RNAseq?
3.5 years ago by
Pac314
▴ 10
0
votes
1
reply
4.4k
views
Comment:
C: Is trimming necessary for RNAseq?
3.5 years ago by
Pac314
▴ 10
7
votes
13
replies
4.4k
views
6 follow
Is trimming necessary for RNAseq?
RNA-Seq
trimming
fastqc
updated 6 months ago by
ATpoint
82k • written 3.5 years ago by
Pac314
▴ 10
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