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patelk26
patelk26
Reputation:
340
Joined:
7.7 years ago
Last seen:
4 weeks ago
Location:
United States
Google Scholar:
Khushbu Patel

Bioinformatics Scientist I working at The Children's Hospital of Philadelphia. I work mainly with ChIP-Seq and RNA-Seq data. I'm proficient in R.

Latest posts by user
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Comment: Comment: Ensembl Ref/alt allele discrepancy
written by patelk26 patelk26
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Comment: Comment: Ensembl Ref/alt allele discrepancy
written by patelk26 patelk26
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6 replies
2.3K views
Ensembl Ref/alt allele discrepancy
ensembl indel dbsnp vcf variant
updated by Mwangana • Mwangana • written by patelk26 patelk26
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Comment: Comment: gene name of DEG ID
written by patelk26 patelk26
2 votes
2 replies
2.8K views
How to interpret Nucleosome banding pattern in scATAC-Seq?
single-cell scatac-seq signac transcriptomics
updated by Jan • Jan • written by patelk26 patelk26
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Comment: Comment: which tool can I use to detect CNVs?
written by patelk26 patelk26
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1 reply
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Comment: Comment: which tool can I use to detect CNVs?
written by patelk26 patelk26
1 vote
2 replies
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Comment: Comment: ESTIMATE (Estimation of STromal and Immune cells in MAlignant Tumor tissues usin
written by patelk26 patelk26
2 votes
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Comment: Comment: How to interpret bimodal distribution of GC-content for RNAseq and can it be rem
written by patelk26 patelk26
1 vote
2 replies
2.7K views
Change STAR Parameters in rsem-calculate-expression
rna-seq rsem star
updated by Jeremy Leipzig Jeremy Leipzig • written by patelk26 patelk26
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1 reply
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Comment: Comment: down regulated and up regulated using r
written by patelk26 patelk26
1 vote
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Comment: Comment: Understanding Seurat Object
written by patelk26 patelk26
3 votes
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Comment: Comment: Is there any gene nomenclature conversion tool that recognizes old names?
written by patelk26 patelk26
2 votes
2 replies
5.8K views
Understanding Seurat Object
rna-seq singlecell seurat
written by patelk26 patelk26
2 votes
0 replies
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Comment: Comment: Translating gene names to entrez id's
written by patelk26 patelk26
2 votes
1 reply
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Answer: C: A layman trying to understand what a FASTA file is
written by patelk26 patelk26
2 votes
1 reply
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Answer: C: Deleting text from row.names in a dataframe
written by patelk26 patelk26
0 votes
1 reply
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Comment: C: readVCF in PopGenome can't open VCF file
written by patelk26 patelk26
1 vote
0 replies
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Comment: C: How to analyse a list of GO terms
written by patelk26 patelk26
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Comment: C: More Ensembl IDs than genes
written by patelk26 patelk26
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