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Mwangana
Mwangana
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Joined:
4.9 years ago
Last seen:
1.1 years ago
Location:
Namibia
Latest posts by user
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Comment: Comment: How to Remove Phasing Information from a VCF File?
written by Mwangana • Mwangana
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584 views
Standard way to represent represent indel (insertion or deletion) alleles within a haplotype
haplotypes indels haploview
written by Mwangana • Mwangana
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Comment: Comment: Command Line Output Folder Options In Haploview
written by Mwangana • Mwangana
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Comment: Comment: How to input INDELs in ped files
written by Mwangana • Mwangana
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Comment: Comment: How to perform Linkage Disequilibrium (LD) analysis in INDELS
written by Mwangana • Mwangana
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Comment: Comment: How to perform Linkage Disequilibrium (LD) analysis in INDELS
written by Mwangana • Mwangana
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683 views
Representation of GT:DS INFO tag for a missing marker in a VCF file
vcf bcftools
written by Mwangana • Mwangana
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Comment: Comment: ADMIXTURE Segmentatio fault
written by Mwangana • Mwangana
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1 reply
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Comment: Comment: ADMIXTURE Segmentatio fault
written by Mwangana • Mwangana
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1 reply
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Comment: Comment: Warning in bcftools when subsetting a VCF by variant ID
updated by Pierre Lindenbaum Pierre Lindenbaum • written by Mwangana • Mwangana
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4 replies
1.8K views
Warning in bcftools when subsetting a VCF by variant ID
bcftools vcf beagle5.5
updated by Pierre Lindenbaum Pierre Lindenbaum • written by Mwangana • Mwangana
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Comment: Comment: Ensembl Ref/alt allele discrepancy
written by Mwangana • Mwangana
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Comment: Comment: NS, AC, AN and AF in VCF file
written by Mwangana • Mwangana
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Comment: Comment: SMARTPCA
written by Mwangana • Mwangana
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1.0K views
How to divide participants into different groups based on genotype for several SNPs when some of the reference alleles are minor alleles
genotypes
written by Mwangana • Mwangana
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Answer: Answer: Genotype representation with 0, 1, 2 - what do they mean?
written by Mwangana • Mwangana
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