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Volka
Volka
Reputation:
180 (Trusted)
Joined:
8.4 years ago
Last seen:
4.5 years ago
Location:
Singapore
Latest posts by user
0 votes
1 reply
984 views
Mapping gene coordinates to transcript exons
genes transcript positions exon
updated by Hamid Ghaedi 333 • | written by Volka 18
0 votes
2 replies
1.4K views
Genotype imputation - do SNP IDs of input files and reference panels matter?
genotype snp reference vcf imputation
updated by 4galaxy77 288 • | written by Volka 18
0 votes
1 reply
1.4K views
Multiple alleles in REF and ALT in VCF file
vcf allele indel bcftools vcftools
updated by Biostar 380 • | written by Volka 18
0 votes
1 reply
0 views
Comment: C: VCF files - how to handle entries with identical ID but different positions and
written by Volka 18
0 votes
1 reply
0 views
Comment: C: VCF files - how to handle entries with identical ID but different positions and
written by Volka 18
0 votes
6 replies
2.3K views
VCF files - how to handle entries with identical ID but different positions and alleles?
sanger duplicate vcf id allele
written by Volka 18
3 votes
3 replies
3.5K views
Michigan Imputation Server - typed-only sites?
imputation snp genotyping michigan vcf
updated by jpeijia 0 • | written by Volka 18
0 votes
2 replies
1.5K views
How can I utilize vectorization on my Pandas script for efficiency?
pandas python vectorization
written by Volka 18
0 votes
1 reply
1 view
Comment: C: Improving efficiency for a looping, mathematical script
written by Volka 18
0 votes
2 replies
1 view
Comment: C: Improving efficiency for a looping, mathematical script
written by Volka 18
0 votes
2 replies
1 view
Comment: C: Improving efficiency for a looping, mathematical script
written by Volka 18
0 votes
12 replies
965 views
Improving efficiency of a script for genotype scoring that enumerates all allele combinations
efficiency loop frequency calculation
updated by Michael Dondrup 5.6K • | written by Volka 18
0 votes
0 replies
1 view
Comment: C: Calculating frequencies of possible combinations of SNP genotypes in a populatio
written by Volka 18
1 vote
2 replies
3.5K views
Calculating frequencies of possible combinations of SNP genotypes in a population
genotype frequency allele
updated by Mwangana 0 • | written by Volka 18
0 votes
2 replies
2.4K views
Method to get all possible combinations of genotypes for a group of SNPs
combination genotype permutation python r
updated by thomaskuilman 85 • | written by Volka 18
0 votes
1 reply
1 view
Comment: C: What is a faster way than using bcftool's view to extract a population from 1000
written by Volka 18
0 votes
1 reply
1 view
Comment: C: What is a faster way than using bcftool's view to extract a population from 1000
written by Volka 18
0 votes
5 replies
4.3K views
What is a faster way than using bcftool's view to extract a population from 1000 Genome VCF files?
bcftools 1000 vcf subset extract
updated by chrchang523 1.1K • | written by Volka 18
6 votes
9 replies
24K views
Polygenic Risk Scores: Odds ratio or Beta-coefficient?
polygenic genetic risk score odds ratio
updated by willebaldo.garcia.m 2 • | written by Volka 18
0 votes
1 reply
1 view
Comment: C: Running ANOVA in R on three tables of gene expression data
written by Volka 18
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